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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
21.4
nTPM
Monaco:
17.6
nTPM
Schmiedel:
248.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
21.4
HPA sample
nTPM
gdT-cell nTPM: 13.1
Samples: 6
Max nTPM: 31.1
Min nTPM: 4.5
P10809_1007
7.8
P10809_1022
4.5
P10809_1041
31.1
P10809_1060
18.0
P10809_1077
10.7
P10809_1098
6.7
MAIT T-cell nTPM: 13.9
Samples: 6
Max nTPM: 23.6
Min nTPM: 3.0
P10809_1006
8.2
P10809_1024
3.0
P10809_1043
22.4
P10809_1062
23.6
P10809_1083
13.9
P10809_1097
12.3
Memory CD4 T-cell nTPM: 7.7
Samples: 6
Max nTPM: 13.6
Min nTPM: 2.9
P10809_1014
2.9
P10809_1026
5.7
P10809_1045
11.9
P10809_1064
13.6
P10809_1086
7.6
P10809_1113
4.6
Memory CD8 T-cell nTPM: 12.6
Samples: 5
Max nTPM: 26.5
Min nTPM: 3.9
P10809_1012
3.9
P10809_1027
5.1
P10809_1046
26.5
P10809_1065
20.2
P10809_1111
7.5
Naive CD4 T-cell nTPM: 6.8
Samples: 6
Max nTPM: 17.0
Min nTPM: 1.7
P10809_1015
2.2
P10809_1030
1.7
P10809_1049
10.3
P10809_1068
17.0
P10809_1085
3.7
P10809_1112
5.6
Naive CD8 T-cell nTPM: 21.1
Samples: 6
Max nTPM: 32.7
Min nTPM: 9.2
P10809_1016
19.9
P10809_1031
20.6
P10809_1050
25.5
P10809_1069
32.7
P10809_1087
9.2
P10809_1110
18.4
T-reg nTPM: 21.4
Samples: 6
Max nTPM: 49.4
Min nTPM: 4.9
P10809_1018
4.9
P10809_1037
6.5
P10809_1056
49.4
P10809_1075
34.8
P10809_1094
16.0
P10809_1106
16.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 13.8
Samples: 4
Max nTPM: 28.9
Min nTPM: 2.4
RHH5202_R3573
2.4
RHH5230_R3602
13.2
RHH5259_R3631
28.9
RHH5288_R3660
10.6
Effector memory CD8 T-cell nTPM: 7.6
Samples: 4
Max nTPM: 12.6
Min nTPM: 3.8
RHH5203_R3574
12.6
RHH5231_R3603
5.9
RHH5260_R3632
3.8
RHH5289_R3661
7.9
MAIT T-cell nTPM: 9.1
Samples: 4
Max nTPM: 11.9
Min nTPM: 6.7
RHH5233_R3605
7.5
RHH5205_R3576
6.7
RHH5262_R3634
11.9
RHH5297_R3663
10.1
Memory CD4 T-cell TFH nTPM: 5.7
Samples: 4
Max nTPM: 11.4
Min nTPM: 1.9
RHH5300_R3666
4.9
RHH5236_R3608
4.7
RHH5265_R3637
11.4
RHH5208_R3579
1.9
Memory CD4 T-cell Th1 nTPM: 10.2
Samples: 4
Max nTPM: 15.4
Min nTPM: 7.3
RHH5210_R3581
9.0
RHH5302_R3668
7.3
RHH5238_R3610
8.9
RHH5267_R3639
15.4
Memory CD4 T-cell Th1/Th17 nTPM: 7.8
Samples: 4
Max nTPM: 14.6
Min nTPM: 0.0
RHH5303_R3669
3.4
RHH5211_R3582
0.0
RHH5239_R3611
14.6
RHH5268_R3640
13.0
Memory CD4 T-cell Th17 nTPM: 8.7
Samples: 4
Max nTPM: 14.5
Min nTPM: 5.0
RHH5304_R3670
5.0
RHH5212_R3583
6.0
RHH5240_R3612
9.1
RHH5269_R3641
14.5
Memory CD4 T-cell Th2 nTPM: 7.1
Samples: 4
Max nTPM: 10.1
Min nTPM: 3.4
RHH5305_R3671
3.4
RHH5213_R3584
5.0
RHH5241_R3613
10.1
RHH5270_R3642
9.8
Naive CD4 T-cell nTPM: 5.1
Samples: 4
Max nTPM: 10.0
Min nTPM: 0.5
RHH5306_R3672
3.6
RHH5214_R3585
0.5
RHH5242_R3614
10.0
RHH5271_R3643
6.4
Naive CD8 T-cell nTPM: 17.6
Samples: 4
Max nTPM: 24.7
Min nTPM: 10.7
RHH5201_R3572
11.3
RHH5229_R3601
10.7
RHH5258_R3630
23.8
RHH5287_R3659
24.7
Non-Vd2 gdTCR nTPM: 5.4
Samples: 4
Max nTPM: 8.2
Min nTPM: 2.9
RHH5235_R3607
5.7
RHH5264_R3636
2.9
RHH5207_R3578
8.2
RHH5299_R3665
4.9
T-reg nTPM: 8.4
Samples: 4
Max nTPM: 13.8
Min nTPM: 3.1
RHH5301_R3667
8.9
RHH5237_R3609
3.1
RHH5266_R3638
13.8
RHH5209_R3580
7.9
Terminal effector memory CD4 T-cell nTPM: 4.7
Samples: 2
Max nTPM: 5.5
Min nTPM: 3.9
RHH5243_R3615
3.9
RHH5272_R3644
5.5
Terminal effector memory CD8 T-cell nTPM: 9.6
Samples: 4
Max nTPM: 15.2
Min nTPM: 2.4
RHH5232_R3604
2.4
RHH5204_R3575
15.2
RHH5261_R3633
11.9
RHH5296_R3662
8.8
Vd2 gdTCR nTPM: 6.9
Samples: 4
Max nTPM: 10.0
Min nTPM: 0.6
RHH5234_R3606
9.7
RHH5206_R3577
0.6
RHH5263_R3635
7.2
RHH5298_R3664
10.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
