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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
242.1
nTPM
Monaco:
74.9
nTPM
Schmiedel:
417.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
242.1
HPA sample
nTPM
gdT-cell nTPM: 171.9
Samples: 6
Max nTPM: 213.6
Min nTPM: 137.5
P10809_1007
137.5
P10809_1022
201.0
P10809_1041
213.6
P10809_1060
139.6
P10809_1077
152.9
P10809_1098
186.9
MAIT T-cell nTPM: 213.5
Samples: 6
Max nTPM: 283.5
Min nTPM: 131.0
P10809_1006
131.0
P10809_1024
243.4
P10809_1043
238.9
P10809_1062
214.7
P10809_1083
169.5
P10809_1097
283.5
Memory CD4 T-cell nTPM: 192.8
Samples: 6
Max nTPM: 235.2
Min nTPM: 154.6
P10809_1014
154.6
P10809_1026
202.0
P10809_1045
235.2
P10809_1064
186.0
P10809_1086
175.3
P10809_1113
203.8
Memory CD8 T-cell nTPM: 203.7
Samples: 5
Max nTPM: 241.7
Min nTPM: 145.2
P10809_1012
145.2
P10809_1027
232.1
P10809_1046
241.7
P10809_1065
190.2
P10809_1111
209.4
Naive CD4 T-cell nTPM: 191.0
Samples: 6
Max nTPM: 285.5
Min nTPM: 126.1
P10809_1015
126.1
P10809_1030
202.6
P10809_1049
285.5
P10809_1068
204.2
P10809_1085
149.1
P10809_1112
178.3
Naive CD8 T-cell nTPM: 189.7
Samples: 6
Max nTPM: 233.0
Min nTPM: 149.4
P10809_1016
149.4
P10809_1031
177.8
P10809_1050
213.2
P10809_1069
233.0
P10809_1087
173.2
P10809_1110
191.6
T-reg nTPM: 242.1
Samples: 6
Max nTPM: 334.4
Min nTPM: 173.5
P10809_1018
173.5
P10809_1037
228.7
P10809_1056
334.4
P10809_1075
236.4
P10809_1094
239.0
P10809_1106
240.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
74.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 49.0
Samples: 4
Max nTPM: 61.5
Min nTPM: 33.3
RHH5202_R3573
45.4
RHH5230_R3602
33.3
RHH5259_R3631
61.5
RHH5288_R3660
55.9
Effector memory CD8 T-cell nTPM: 38.6
Samples: 4
Max nTPM: 45.9
Min nTPM: 24.9
RHH5203_R3574
45.9
RHH5231_R3603
39.9
RHH5260_R3632
43.8
RHH5289_R3661
24.9
MAIT T-cell nTPM: 61.2
Samples: 4
Max nTPM: 75.4
Min nTPM: 49.8
RHH5233_R3605
49.8
RHH5205_R3576
50.4
RHH5262_R3634
69.3
RHH5297_R3663
75.4
Memory CD4 T-cell TFH nTPM: 52.4
Samples: 4
Max nTPM: 74.2
Min nTPM: 40.5
RHH5300_R3666
50.3
RHH5236_R3608
74.2
RHH5265_R3637
40.5
RHH5208_R3579
44.6
Memory CD4 T-cell Th1 nTPM: 64.8
Samples: 4
Max nTPM: 91.2
Min nTPM: 40.5
RHH5210_R3581
40.5
RHH5302_R3668
91.2
RHH5238_R3610
76.4
RHH5267_R3639
51.2
Memory CD4 T-cell Th1/Th17 nTPM: 60.6
Samples: 4
Max nTPM: 89.8
Min nTPM: 35.2
RHH5303_R3669
89.8
RHH5211_R3582
56.2
RHH5239_R3611
35.2
RHH5268_R3640
61.0
Memory CD4 T-cell Th17 nTPM: 47.4
Samples: 4
Max nTPM: 59.5
Min nTPM: 35.3
RHH5304_R3670
56.4
RHH5212_R3583
59.5
RHH5240_R3612
35.3
RHH5269_R3641
38.4
Memory CD4 T-cell Th2 nTPM: 51.7
Samples: 4
Max nTPM: 62.0
Min nTPM: 37.1
RHH5305_R3671
62.0
RHH5213_R3584
51.8
RHH5241_R3613
56.0
RHH5270_R3642
37.1
Naive CD4 T-cell nTPM: 51.7
Samples: 4
Max nTPM: 75.7
Min nTPM: 31.8
RHH5306_R3672
58.5
RHH5214_R3585
75.7
RHH5242_R3614
31.8
RHH5271_R3643
40.6
Naive CD8 T-cell nTPM: 42.2
Samples: 4
Max nTPM: 62.3
Min nTPM: 24.6
RHH5201_R3572
24.6
RHH5229_R3601
37.0
RHH5258_R3630
44.9
RHH5287_R3659
62.3
Non-Vd2 gdTCR nTPM: 59.6
Samples: 4
Max nTPM: 92.2
Min nTPM: 42.0
RHH5235_R3607
42.0
RHH5264_R3636
54.8
RHH5207_R3578
49.4
RHH5299_R3665
92.2
T-reg nTPM: 54.0
Samples: 4
Max nTPM: 68.5
Min nTPM: 44.8
RHH5301_R3667
68.5
RHH5237_R3609
54.3
RHH5266_R3638
48.4
RHH5209_R3580
44.8
Terminal effector memory CD4 T-cell nTPM: 48.6
Samples: 2
Max nTPM: 49.4
Min nTPM: 47.7
RHH5243_R3615
49.4
RHH5272_R3644
47.7
Terminal effector memory CD8 T-cell nTPM: 73.5
Samples: 4
Max nTPM: 140.1
Min nTPM: 33.2
RHH5232_R3604
33.2
RHH5204_R3575
140.1
RHH5261_R3633
59.1
RHH5296_R3662
61.4
Vd2 gdTCR nTPM: 74.9
Samples: 4
Max nTPM: 115.0
Min nTPM: 35.0
RHH5234_R3606
35.0
RHH5206_R3577
107.9
RHH5263_R3635
41.8
RHH5298_R3664
115.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
