HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:78.5 nTPM
HPA Brain:98.4 nTPM
GTEx:78.5 nTPM
FANTOM5:155.4 Scaled Tags Per Million
Pig:95.4 nTPM
Mouse:93.0 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003303Antibody HPA030445
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 98.4
Sample id Sample description nTPM
Hippocampus
nTPM: 86.0
1898 Male, age 80, left hemisphere 97.9
1855 Male, age 76, left hemisphere 91.7
2148 Female, age 91, left hemisphere 91.6
2621 Female, age 67, right hemisphere 82.3
1911 Female, age 85, right hemisphere 80.8
2529 Female, age 94, left hemisphere 71.7
Dentate gyrus
nTPM: 80.4
2010 Male, age 76, both hemispheres 92.4
1927 Female, age 91, both hemispheres 89.4
2531 Female, age 67, both hemispheres 86.0
2530 Female, age 94, left hemisphere 79.8
2246 Female, age 85, both hemispheres 71.6
2528 Male, age 74, both hemispheres 63.2
Entorhinal gyrus
nTPM: 70.6
1938 Female, age 85, left hemisphere 82.4
2764 Male, age 80, right hemisphere 77.4
2117 Female, age 91, right hemisphere 76.3
2613 Female, age 94, left hemisphere 72.1
1787 Male, age 76, left hemisphere 60.4
2686 Male, age 75, right hemisphere 54.8
Hippocampus, CA1
nTPM: 98.4
2749 Male, age 80, left hemisphere 152.4
1873 Female, age 85, both hemispheres 96.1
2527 Male, age 74, both hemispheres 90.6
2045 Male, age 76, both hemispheres 89.4
2082 Female, age 91, right hemisphere 63.6
Hippocampus, CA2
nTPM: 84.8
1892 Male, age 76, both hemispheres 110.6
1963 Male, age 80, left hemisphere 107.2
2249 Male, age 74, both hemispheres 86.8
2437 Female, age 94, left hemisphere 74.2
2113 Female, age 91, right hemisphere 65.4
1940 Female, age 85, left hemisphere 64.5
Hippocampus, CA3
nTPM: 87.6
2137 Male, age 80, left hemisphere 115.3
2620 Female, age 94, left hemisphere 104.5
1867 Male, age 76, both hemispheres 81.0
2861 Female, age 67, both hemispheres 77.5
1891 Female, age 85, both hemispheres 74.1
2436 Male, age 74, both hemispheres 73.0
Parahippocampal cortex
nTPM: 70.3
2245 Female, age 91, both hemispheres 82.6
2693 Female, age 94, both hemispheres 82.5
2018 Male, age 76, both hemispheres 75.4
1933 Female, age 85, both hemispheres 72.7
1850 Male, age 80, both hemispheres 71.4
2250 Female, age 67, right hemisphere 69.7
2532 Female, age 72, left hemisphere 68.7
1990 Female, age 91, right hemisphere 64.4
2622 Female, age 67, right hemisphere 62.3
2692 Male, age 74, both hemispheres 53.4
Perirhinal gyrus
nTPM: 68.9
1841 Female, age 85, right hemisphere 74.0
1847 Female, age 91, left hemisphere 72.2
1794 Male, age 80, right hemisphere 72.1
2521 Female, age 94, right hemisphere 70.5
2848 Male, age 76, right hemisphere 55.9
Subiculum
nTPM: 76.7
1901 Male, age 80, both hemispheres 91.8
2729 Female, age 91, right hemisphere 83.2
1977 Female, age 85, both hemispheres 80.8
2042 Male, age 76, both hemispheres 74.8
2619 Male, age 74, both hemispheres 67.9
2438 Female, age 94, left hemisphere 61.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 78.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 78.5
Samples: 197

Max nTPM: 170.1
Min nTPM: 27.5
Std nTPM: 21.6
Median nTPM: 76.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 170.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 136.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 130.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 125.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 123.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 122.3
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 121.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 120.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 118.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 116.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 114.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 155.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 155.4
FF:10169-103B7 60 years, female 201.4
FF:10153-102I9 76 years, female 109.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 95.4
Pig sample Sample description nTPM
Subiculum
nTPM: 83.3
Samples: 4

Max nTPM: 104.8
Min nTPM: 71.5
Sample A Female 104.8
Sample B Female 81.9
Sample C Male 75.0
Sample D Male 71.5
Dorsal hippocampus
nTPM: 95.4
Samples: 4

Max nTPM: 117.0
Min nTPM: 79.8
Sample A Female 117.0
Sample B Female 101.0
Sample C Male 79.8
Sample D Male 83.9
Entorhinal cortex
nTPM: 83.2
Samples: 4

Max nTPM: 94.2
Min nTPM: 66.1
Sample A Female 81.9
Sample B Female 90.5
Sample C Male 94.2
Sample D Male 66.1
Ventral hippocampus
nTPM: 93.4
Samples: 4

Max nTPM: 99.7
Min nTPM: 85.1
Sample A Female 96.8
Sample B Female 85.1
Sample C Male 99.7
Sample D Male 91.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 93.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 93.0
Samples: 4

Max nTPM: 103.0
Min nTPM: 84.1
Sample A Male 84.1
Sample B Male 94.9
Sample C Female 90.1
Sample D Female 103.0
Hippocampal formation
nTPM: 83.0
Samples: 4

Max nTPM: 92.5
Min nTPM: 75.5
Sample A Male 92.5
Sample B Male 80.2
Sample C Female 83.8
Sample D Female 75.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
75651166 Antisense, RP_060518_01_C01, Mouse strain C57BL/6J (56 days, male) 1.3
74990503 Antisense, RP_060410_01_B04, Mouse strain C57BL/6J (56 days, male) 0.6

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