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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
289.6
nTPM
Monaco:
138.2
nTPM
Schmiedel:
212.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
289.6
HPA sample
nTPM
gdT-cell nTPM: 190.6
Samples: 6
Max nTPM: 225.8
Min nTPM: 164.7
P10809_1007
164.7
P10809_1022
191.3
P10809_1041
225.8
P10809_1060
165.1
P10809_1077
188.7
P10809_1098
207.9
MAIT T-cell nTPM: 157.8
Samples: 6
Max nTPM: 199.7
Min nTPM: 101.3
P10809_1006
101.3
P10809_1024
158.2
P10809_1043
196.9
P10809_1062
145.5
P10809_1083
145.3
P10809_1097
199.7
Memory CD4 T-cell nTPM: 190.2
Samples: 6
Max nTPM: 240.9
Min nTPM: 141.7
P10809_1014
141.7
P10809_1026
240.9
P10809_1045
231.0
P10809_1064
176.4
P10809_1086
179.1
P10809_1113
172.0
Memory CD8 T-cell nTPM: 196.9
Samples: 5
Max nTPM: 242.6
Min nTPM: 151.5
P10809_1012
151.5
P10809_1027
242.6
P10809_1046
219.8
P10809_1065
179.2
P10809_1111
191.4
Naive CD4 T-cell nTPM: 158.9
Samples: 6
Max nTPM: 215.3
Min nTPM: 98.5
P10809_1015
98.5
P10809_1030
161.5
P10809_1049
215.3
P10809_1068
132.2
P10809_1085
203.1
P10809_1112
142.9
Naive CD8 T-cell nTPM: 177.8
Samples: 6
Max nTPM: 200.2
Min nTPM: 138.0
P10809_1016
138.0
P10809_1031
197.2
P10809_1050
192.4
P10809_1069
186.5
P10809_1087
200.2
P10809_1110
152.7
T-reg nTPM: 289.6
Samples: 6
Max nTPM: 365.7
Min nTPM: 248.6
P10809_1018
248.6
P10809_1037
266.4
P10809_1056
365.7
P10809_1075
284.6
P10809_1094
309.7
P10809_1106
262.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
138.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 74.1
Samples: 4
Max nTPM: 117.9
Min nTPM: 45.4
RHH5202_R3573
45.4
RHH5230_R3602
57.9
RHH5259_R3631
75.1
RHH5288_R3660
117.9
Effector memory CD8 T-cell nTPM: 67.2
Samples: 4
Max nTPM: 80.6
Min nTPM: 42.2
RHH5203_R3574
80.6
RHH5231_R3603
66.4
RHH5260_R3632
79.5
RHH5289_R3661
42.2
MAIT T-cell nTPM: 59.3
Samples: 4
Max nTPM: 80.1
Min nTPM: 42.8
RHH5233_R3605
62.4
RHH5205_R3576
42.8
RHH5262_R3634
51.7
RHH5297_R3663
80.1
Memory CD4 T-cell TFH nTPM: 61.0
Samples: 4
Max nTPM: 86.2
Min nTPM: 50.0
RHH5300_R3666
55.0
RHH5236_R3608
86.2
RHH5265_R3637
52.9
RHH5208_R3579
50.0
Memory CD4 T-cell Th1 nTPM: 79.7
Samples: 4
Max nTPM: 140.8
Min nTPM: 45.1
RHH5210_R3581
45.1
RHH5302_R3668
140.8
RHH5238_R3610
71.7
RHH5267_R3639
61.0
Memory CD4 T-cell Th1/Th17 nTPM: 77.8
Samples: 4
Max nTPM: 127.9
Min nTPM: 47.6
RHH5303_R3669
127.9
RHH5211_R3582
69.0
RHH5239_R3611
47.6
RHH5268_R3640
66.7
Memory CD4 T-cell Th17 nTPM: 47.5
Samples: 4
Max nTPM: 59.9
Min nTPM: 36.6
RHH5304_R3670
48.0
RHH5212_R3583
59.9
RHH5240_R3612
45.3
RHH5269_R3641
36.6
Memory CD4 T-cell Th2 nTPM: 57.7
Samples: 4
Max nTPM: 79.4
Min nTPM: 40.4
RHH5305_R3671
58.4
RHH5213_R3584
52.5
RHH5241_R3613
79.4
RHH5270_R3642
40.4
Naive CD4 T-cell nTPM: 48.1
Samples: 4
Max nTPM: 71.1
Min nTPM: 36.3
RHH5306_R3672
41.3
RHH5214_R3585
71.1
RHH5242_R3614
43.5
RHH5271_R3643
36.3
Naive CD8 T-cell nTPM: 44.3
Samples: 4
Max nTPM: 56.2
Min nTPM: 36.2
RHH5201_R3572
36.2
RHH5229_R3601
43.5
RHH5258_R3630
56.2
RHH5287_R3659
41.1
Non-Vd2 gdTCR nTPM: 93.2
Samples: 4
Max nTPM: 115.5
Min nTPM: 67.3
RHH5235_R3607
67.3
RHH5264_R3636
112.6
RHH5207_R3578
77.5
RHH5299_R3665
115.5
T-reg nTPM: 71.4
Samples: 4
Max nTPM: 115.0
Min nTPM: 49.6
RHH5301_R3667
115.0
RHH5237_R3609
63.8
RHH5266_R3638
57.3
RHH5209_R3580
49.6
Terminal effector memory CD4 T-cell nTPM: 64.8
Samples: 2
Max nTPM: 79.9
Min nTPM: 49.7
RHH5243_R3615
49.7
RHH5272_R3644
79.9
Terminal effector memory CD8 T-cell nTPM: 130.0
Samples: 4
Max nTPM: 241.8
Min nTPM: 74.3
RHH5232_R3604
74.3
RHH5204_R3575
241.8
RHH5261_R3633
88.5
RHH5296_R3662
115.4
Vd2 gdTCR nTPM: 138.2
Samples: 4
Max nTPM: 233.7
Min nTPM: 93.9
RHH5234_R3606
93.9
RHH5206_R3577
233.7
RHH5263_R3635
99.8
RHH5298_R3664
125.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
