HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:27.3 nTPM
HPA Brain:33.1 nTPM
GTEx:27.3 nTPM
FANTOM5:23.6 Scaled Tags Per Million
Pig:35.9 nTPM
Mouse:45.4 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023269
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.1
Sample id Sample description nTPM
Hippocampus
nTPM: 27.0
1898 Male, age 80, left hemisphere 35.3
2621 Female, age 67, right hemisphere 30.0
2529 Female, age 94, left hemisphere 27.2
1855 Male, age 76, left hemisphere 24.9
1911 Female, age 85, right hemisphere 23.1
2148 Female, age 91, left hemisphere 21.7
Dentate gyrus
nTPM: 28.3
2530 Female, age 94, left hemisphere 42.6
2010 Male, age 76, both hemispheres 28.1
1927 Female, age 91, both hemispheres 27.0
2531 Female, age 67, both hemispheres 25.5
2528 Male, age 74, both hemispheres 23.9
2246 Female, age 85, both hemispheres 22.9
Entorhinal gyrus
nTPM: 33.1
2686 Male, age 75, right hemisphere 36.9
2764 Male, age 80, right hemisphere 35.3
2117 Female, age 91, right hemisphere 34.9
2613 Female, age 94, left hemisphere 30.9
1938 Female, age 85, left hemisphere 30.6
1787 Male, age 76, left hemisphere 30.1
Hippocampus, CA1
nTPM: 25.9
2749 Male, age 80, left hemisphere 39.2
1873 Female, age 85, both hemispheres 26.8
2527 Male, age 74, both hemispheres 24.4
2082 Female, age 91, right hemisphere 21.0
2045 Male, age 76, both hemispheres 18.2
Hippocampus, CA2
nTPM: 31.2
1963 Male, age 80, left hemisphere 43.0
1892 Male, age 76, both hemispheres 40.1
2437 Female, age 94, left hemisphere 30.7
1940 Female, age 85, left hemisphere 26.1
2249 Male, age 74, both hemispheres 24.4
2113 Female, age 91, right hemisphere 22.9
Hippocampus, CA3
nTPM: 25.8
1867 Male, age 76, both hemispheres 33.2
1891 Female, age 85, both hemispheres 31.5
2137 Male, age 80, left hemisphere 27.5
2861 Female, age 67, both hemispheres 22.7
2436 Male, age 74, both hemispheres 20.5
2620 Female, age 94, left hemisphere 19.2
Parahippocampal cortex
nTPM: 28.3
1850 Male, age 80, both hemispheres 37.9
1990 Female, age 91, right hemisphere 32.7
2532 Female, age 72, left hemisphere 32.7
2692 Male, age 74, both hemispheres 31.6
1933 Female, age 85, both hemispheres 29.7
2693 Female, age 94, both hemispheres 28.2
2245 Female, age 91, both hemispheres 26.8
2018 Male, age 76, both hemispheres 22.9
2250 Female, age 67, right hemisphere 20.6
2622 Female, age 67, right hemisphere 19.5
Perirhinal gyrus
nTPM: 30.3
1794 Male, age 80, right hemisphere 32.6
1847 Female, age 91, left hemisphere 32.3
2848 Male, age 76, right hemisphere 30.8
1841 Female, age 85, right hemisphere 27.9
2521 Female, age 94, right hemisphere 27.9
Subiculum
nTPM: 31.3
1901 Male, age 80, both hemispheres 39.1
2438 Female, age 94, left hemisphere 37.6
1977 Female, age 85, both hemispheres 36.4
2042 Male, age 76, both hemispheres 28.0
2619 Male, age 74, both hemispheres 24.3
2729 Female, age 91, right hemisphere 22.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.3
Samples: 197

Max nTPM: 78.0
Min nTPM: 10.8
Std nTPM: 11.4
Median nTPM: 24.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 78.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 77.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 67.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 61.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 56.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 54.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 52.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 51.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 49.0
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 48.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 47.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.6
FF:10153-102I9 76 years, female 28.5
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.9
Pig sample Sample description nTPM
Subiculum
nTPM: 27.3
Samples: 4

Max nTPM: 30.4
Min nTPM: 24.5
Sample A Female 30.4
Sample B Female 26.7
Sample C Male 24.5
Sample D Male 27.7
Dorsal hippocampus
nTPM: 35.9
Samples: 4

Max nTPM: 46.9
Min nTPM: 19.4
Sample A Female 46.9
Sample B Female 31.5
Sample C Male 45.9
Sample D Male 19.4
Entorhinal cortex
nTPM: 25.5
Samples: 4

Max nTPM: 29.3
Min nTPM: 23.7
Sample A Female 23.7
Sample B Female 29.3
Sample C Male 25.0
Sample D Male 24.1
Ventral hippocampus
nTPM: 26.3
Samples: 4

Max nTPM: 30.8
Min nTPM: 18.3
Sample A Female 30.8
Sample B Female 18.3
Sample C Male 25.2
Sample D Male 30.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.3
Samples: 4

Max nTPM: 46.5
Min nTPM: 42.3
Sample A Male 44.0
Sample B Male 44.4
Sample C Female 42.3
Sample D Female 46.5
Hippocampal formation
nTPM: 45.4
Samples: 4

Max nTPM: 49.7
Min nTPM: 41.0
Sample A Male 46.6
Sample B Male 44.1
Sample C Female 49.7
Sample D Female 41.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
70546275 Antisense, RP_050623_03_H10, Mouse strain C57BL/6J (56 days, male) 4.1

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