HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:99.1 nTPM
HPA Brain:99.0 nTPM
GTEx:99.1 nTPM
FANTOM5:1.1 Scaled Tags Per Million
Mouse:150.4 nTPM
Allen mouse:10.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001666
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 99.0
Sample id Sample description nTPM
Hippocampus
nTPM: 95.6
2529 Female, age 94, left hemisphere 104.4
2621 Female, age 67, right hemisphere 97.6
1855 Male, age 76, left hemisphere 97.1
1898 Male, age 80, left hemisphere 95.9
1911 Female, age 85, right hemisphere 90.5
2148 Female, age 91, left hemisphere 88.0
Dentate gyrus
nTPM: 92.4
2530 Female, age 94, left hemisphere 105.3
2246 Female, age 85, both hemispheres 99.1
2010 Male, age 76, both hemispheres 97.8
2531 Female, age 67, both hemispheres 87.7
1927 Female, age 91, both hemispheres 85.5
2528 Male, age 74, both hemispheres 78.8
Entorhinal gyrus
nTPM: 94.4
2686 Male, age 75, right hemisphere 110.3
1938 Female, age 85, left hemisphere 99.9
2613 Female, age 94, left hemisphere 92.6
2764 Male, age 80, right hemisphere 91.4
2117 Female, age 91, right hemisphere 91.2
1787 Male, age 76, left hemisphere 80.7
Hippocampus, CA1
nTPM: 92.2
2749 Male, age 80, left hemisphere 112.9
1873 Female, age 85, both hemispheres 100.1
2045 Male, age 76, both hemispheres 88.0
2082 Female, age 91, right hemisphere 80.5
2527 Male, age 74, both hemispheres 79.4
Hippocampus, CA2
nTPM: 87.4
1892 Male, age 76, both hemispheres 98.5
1940 Female, age 85, left hemisphere 92.4
2437 Female, age 94, left hemisphere 87.8
2249 Male, age 74, both hemispheres 87.5
2113 Female, age 91, right hemisphere 80.3
1963 Male, age 80, left hemisphere 78.2
Hippocampus, CA3
nTPM: 87.7
1891 Female, age 85, both hemispheres 101.3
2137 Male, age 80, left hemisphere 101.0
1867 Male, age 76, both hemispheres 99.7
2861 Female, age 67, both hemispheres 79.7
2620 Female, age 94, left hemisphere 73.6
2436 Male, age 74, both hemispheres 71.0
Parahippocampal cortex
nTPM: 96.3
2245 Female, age 91, both hemispheres 114.9
1850 Male, age 80, both hemispheres 104.9
2532 Female, age 72, left hemisphere 103.3
2692 Male, age 74, both hemispheres 96.7
1933 Female, age 85, both hemispheres 96.5
2250 Female, age 67, right hemisphere 96.5
1990 Female, age 91, right hemisphere 90.8
2018 Male, age 76, both hemispheres 90.8
2693 Female, age 94, both hemispheres 85.8
2622 Female, age 67, right hemisphere 82.8
Perirhinal gyrus
nTPM: 90.0
1841 Female, age 85, right hemisphere 102.3
2848 Male, age 76, right hemisphere 96.8
1794 Male, age 80, right hemisphere 90.3
1847 Female, age 91, left hemisphere 84.6
2521 Female, age 94, right hemisphere 75.7
Subiculum
nTPM: 99.0
2042 Male, age 76, both hemispheres 115.6
1901 Male, age 80, both hemispheres 104.6
2438 Female, age 94, left hemisphere 104.4
2619 Male, age 74, both hemispheres 97.4
1977 Female, age 85, both hemispheres 94.6
2729 Female, age 91, right hemisphere 77.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 99.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 99.1
Samples: 197

Max nTPM: 182.6
Min nTPM: 60.5
Std nTPM: 19.7
Median nTPM: 95.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 182.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 167.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 155.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 153.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 149.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 141.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 140.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 139.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 139.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 136.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 134.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.1
FF:10153-102I9 76 years, female 1.1
FF:10169-103B7 60 years, female 1.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 150.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 146.4
Samples: 4

Max nTPM: 155.8
Min nTPM: 129.8
Sample A Male 148.7
Sample B Male 155.8
Sample C Female 129.8
Sample D Female 151.3
Hippocampal formation
nTPM: 150.4
Samples: 4

Max nTPM: 174.3
Min nTPM: 134.1
Sample A Male 134.1
Sample B Male 174.3
Sample C Female 153.0
Sample D Female 140.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.2
68161477 Antisense, RP_041122_01_E07, Mouse strain C57BL/6J (56 days, male) 10.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org