HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:7.9 nTPM
HPA Brain:24.8 nTPM
GTEx:7.9 nTPM
FANTOM5:16.4 Scaled Tags Per Million
Pig:18.0 nTPM
Mouse:11.5 nTPM
Allen mouse:12.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.8
Sample id Sample description nTPM
Hippocampus
nTPM: 24.0
2529 Female, age 94, left hemisphere 27.0
1911 Female, age 85, right hemisphere 26.7
2148 Female, age 91, left hemisphere 25.1
2621 Female, age 67, right hemisphere 22.8
1898 Male, age 80, left hemisphere 22.6
1855 Male, age 76, left hemisphere 19.6
Dentate gyrus
nTPM: 24.8
2530 Female, age 94, left hemisphere 29.5
2528 Male, age 74, both hemispheres 25.8
2531 Female, age 67, both hemispheres 25.0
2246 Female, age 85, both hemispheres 23.8
2010 Male, age 76, both hemispheres 23.4
1927 Female, age 91, both hemispheres 21.4
Entorhinal gyrus
nTPM: 23.8
2117 Female, age 91, right hemisphere 28.0
2764 Male, age 80, right hemisphere 26.8
2613 Female, age 94, left hemisphere 23.9
2686 Male, age 75, right hemisphere 22.4
1938 Female, age 85, left hemisphere 21.6
1787 Male, age 76, left hemisphere 19.9
Hippocampus, CA1
nTPM: 23.1
2749 Male, age 80, left hemisphere 29.5
1873 Female, age 85, both hemispheres 23.1
2527 Male, age 74, both hemispheres 22.7
2082 Female, age 91, right hemisphere 22.1
2045 Male, age 76, both hemispheres 18.3
Hippocampus, CA2
nTPM: 24.1
1963 Male, age 80, left hemisphere 27.3
2249 Male, age 74, both hemispheres 27.3
2113 Female, age 91, right hemisphere 25.5
1940 Female, age 85, left hemisphere 23.7
2437 Female, age 94, left hemisphere 20.9
1892 Male, age 76, both hemispheres 19.7
Hippocampus, CA3
nTPM: 22.6
1891 Female, age 85, both hemispheres 26.6
2137 Male, age 80, left hemisphere 23.1
2620 Female, age 94, left hemisphere 22.9
2861 Female, age 67, both hemispheres 22.8
1867 Male, age 76, both hemispheres 20.3
2436 Male, age 74, both hemispheres 20.2
Parahippocampal cortex
nTPM: 21.5
2532 Female, age 72, left hemisphere 24.9
2245 Female, age 91, both hemispheres 24.1
1990 Female, age 91, right hemisphere 23.3
1933 Female, age 85, both hemispheres 23.0
2692 Male, age 74, both hemispheres 22.6
1850 Male, age 80, both hemispheres 19.7
2693 Female, age 94, both hemispheres 19.7
2018 Male, age 76, both hemispheres 19.4
2250 Female, age 67, right hemisphere 19.4
2622 Female, age 67, right hemisphere 19.0
Perirhinal gyrus
nTPM: 18.5
2848 Male, age 76, right hemisphere 19.8
2521 Female, age 94, right hemisphere 19.5
1794 Male, age 80, right hemisphere 18.1
1841 Female, age 85, right hemisphere 17.9
1847 Female, age 91, left hemisphere 17.2
Subiculum
nTPM: 24.6
2042 Male, age 76, both hemispheres 28.6
1901 Male, age 80, both hemispheres 27.3
1977 Female, age 85, both hemispheres 27.2
2729 Female, age 91, right hemisphere 22.9
2619 Male, age 74, both hemispheres 22.1
2438 Female, age 94, left hemisphere 19.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.9
Samples: 197

Max nTPM: 16.2
Min nTPM: 3.5
Std nTPM: 2.0
Median nTPM: 7.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 16.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 14.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 13.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 12.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 12.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 12.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 12.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 11.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 11.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 11.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 11.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.4
FF:10153-102I9 76 years, female 24.6
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.0
Pig sample Sample description nTPM
Subiculum
nTPM: 15.7
Samples: 4

Max nTPM: 16.5
Min nTPM: 15.0
Sample A Female 16.1
Sample B Female 16.5
Sample C Male 15.0
Sample D Male 15.3
Dorsal hippocampus
nTPM: 18.0
Samples: 4

Max nTPM: 19.0
Min nTPM: 16.7
Sample A Female 18.0
Sample B Female 19.0
Sample C Male 16.7
Sample D Male 18.4
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 15.4
Min nTPM: 13.3
Sample A Female 15.4
Sample B Female 14.2
Sample C Male 14.6
Sample D Male 13.3
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 18.3
Min nTPM: 15.4
Sample A Female 16.8
Sample B Female 18.3
Sample C Male 15.4
Sample D Male 16.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.0
Samples: 4

Max nTPM: 9.2
Min nTPM: 6.3
Sample A Male 7.7
Sample B Male 9.2
Sample C Female 8.6
Sample D Female 6.3
Hippocampal formation
nTPM: 11.5
Samples: 4

Max nTPM: 13.3
Min nTPM: 9.3
Sample A Male 11.6
Sample B Male 11.7
Sample C Female 13.3
Sample D Female 9.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.8
71380501 Antisense, RP_050414_02_A02, Mouse strain C57BL/6J (56 days, male) 12.8

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