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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
74.2
nTPM
Monaco:
89.7
nTPM
Schmiedel:
62.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
74.2
HPA sample
nTPM
gdT-cell nTPM: 35.9
Samples: 6
Max nTPM: 46.9
Min nTPM: 27.8
P10809_1007
28.0
P10809_1022
45.2
P10809_1041
46.9
P10809_1060
30.5
P10809_1077
36.7
P10809_1098
27.8
MAIT T-cell nTPM: 52.6
Samples: 6
Max nTPM: 73.3
Min nTPM: 31.1
P10809_1006
46.8
P10809_1024
58.9
P10809_1043
57.5
P10809_1062
47.9
P10809_1083
31.1
P10809_1097
73.3
Memory CD4 T-cell nTPM: 51.6
Samples: 6
Max nTPM: 63.1
Min nTPM: 38.3
P10809_1014
50.2
P10809_1026
48.8
P10809_1045
63.1
P10809_1064
38.3
P10809_1086
48.3
P10809_1113
60.6
Memory CD8 T-cell nTPM: 40.2
Samples: 5
Max nTPM: 48.3
Min nTPM: 33.0
P10809_1012
48.3
P10809_1027
40.4
P10809_1046
46.0
P10809_1065
33.0
P10809_1111
33.2
Naive CD4 T-cell nTPM: 29.3
Samples: 6
Max nTPM: 34.8
Min nTPM: 21.5
P10809_1015
27.0
P10809_1030
21.5
P10809_1049
34.8
P10809_1068
34.7
P10809_1085
27.7
P10809_1112
29.8
Naive CD8 T-cell nTPM: 27.9
Samples: 6
Max nTPM: 31.6
Min nTPM: 18.3
P10809_1016
26.8
P10809_1031
31.6
P10809_1050
29.0
P10809_1069
30.0
P10809_1087
31.6
P10809_1110
18.3
T-reg nTPM: 74.2
Samples: 6
Max nTPM: 93.8
Min nTPM: 61.3
P10809_1018
66.8
P10809_1037
61.3
P10809_1056
93.8
P10809_1075
62.1
P10809_1094
82.9
P10809_1106
78.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
89.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 65.1
Samples: 4
Max nTPM: 97.5
Min nTPM: 51.3
RHH5202_R3573
57.9
RHH5230_R3602
97.5
RHH5259_R3631
51.3
RHH5288_R3660
53.5
Effector memory CD8 T-cell nTPM: 54.1
Samples: 4
Max nTPM: 58.0
Min nTPM: 48.3
RHH5203_R3574
48.3
RHH5231_R3603
58.0
RHH5260_R3632
55.8
RHH5289_R3661
54.3
MAIT T-cell nTPM: 50.0
Samples: 4
Max nTPM: 53.3
Min nTPM: 46.7
RHH5233_R3605
46.7
RHH5205_R3576
53.3
RHH5262_R3634
49.8
RHH5297_R3663
50.3
Memory CD4 T-cell TFH nTPM: 53.8
Samples: 4
Max nTPM: 69.7
Min nTPM: 27.7
RHH5300_R3666
66.6
RHH5236_R3608
51.1
RHH5265_R3637
69.7
RHH5208_R3579
27.7
Memory CD4 T-cell Th1 nTPM: 57.9
Samples: 4
Max nTPM: 61.0
Min nTPM: 49.3
RHH5210_R3581
49.3
RHH5302_R3668
61.0
RHH5238_R3610
60.1
RHH5267_R3639
61.0
Memory CD4 T-cell Th1/Th17 nTPM: 71.4
Samples: 4
Max nTPM: 91.5
Min nTPM: 60.5
RHH5303_R3669
60.6
RHH5211_R3582
91.5
RHH5239_R3611
60.5
RHH5268_R3640
72.9
Memory CD4 T-cell Th17 nTPM: 83.9
Samples: 4
Max nTPM: 110.6
Min nTPM: 69.3
RHH5304_R3670
82.8
RHH5212_R3583
73.0
RHH5240_R3612
110.6
RHH5269_R3641
69.3
Memory CD4 T-cell Th2 nTPM: 89.8
Samples: 4
Max nTPM: 102.5
Min nTPM: 81.3
RHH5305_R3671
82.2
RHH5213_R3584
102.5
RHH5241_R3613
93.0
RHH5270_R3642
81.3
Naive CD4 T-cell nTPM: 43.2
Samples: 4
Max nTPM: 47.3
Min nTPM: 35.9
RHH5306_R3672
43.0
RHH5214_R3585
47.3
RHH5242_R3614
46.4
RHH5271_R3643
35.9
Naive CD8 T-cell nTPM: 23.6
Samples: 4
Max nTPM: 32.2
Min nTPM: 7.7
RHH5201_R3572
7.7
RHH5229_R3601
32.2
RHH5258_R3630
22.9
RHH5287_R3659
31.4
Non-Vd2 gdTCR nTPM: 48.4
Samples: 4
Max nTPM: 73.5
Min nTPM: 36.8
RHH5235_R3607
73.5
RHH5264_R3636
42.9
RHH5207_R3578
40.2
RHH5299_R3665
36.8
T-reg nTPM: 61.9
Samples: 4
Max nTPM: 71.0
Min nTPM: 57.3
RHH5301_R3667
58.1
RHH5237_R3609
61.0
RHH5266_R3638
57.3
RHH5209_R3580
71.0
Terminal effector memory CD4 T-cell nTPM: 74.8
Samples: 2
Max nTPM: 81.6
Min nTPM: 68.0
RHH5243_R3615
81.6
RHH5272_R3644
68.0
Terminal effector memory CD8 T-cell nTPM: 53.2
Samples: 4
Max nTPM: 68.2
Min nTPM: 41.4
RHH5232_R3604
68.2
RHH5204_R3575
41.4
RHH5261_R3633
48.3
RHH5296_R3662
54.8
Vd2 gdTCR nTPM: 58.4
Samples: 4
Max nTPM: 75.9
Min nTPM: 43.2
RHH5234_R3606
75.9
RHH5206_R3577
43.2
RHH5263_R3635
61.2
RHH5298_R3664
53.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
