HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:646.0 nTPM
HPA Brain:328.6 nTPM
GTEx:646.0 nTPM
FANTOM5:245.0 Scaled Tags Per Million
Pig:638.8 nTPM
Mouse:238.8 nTPM
Allen mouse:17.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 328.6
Sample id Sample description nTPM
Hippocampus
nTPM: 328.6
1898 Male, age 80, left hemisphere 388.6
1855 Male, age 76, left hemisphere 340.5
2621 Female, age 67, right hemisphere 321.9
2529 Female, age 94, left hemisphere 321.2
1911 Female, age 85, right hemisphere 306.6
2148 Female, age 91, left hemisphere 292.6
Dentate gyrus
nTPM: 297.5
2010 Male, age 76, both hemispheres 334.1
2530 Female, age 94, left hemisphere 307.7
2528 Male, age 74, both hemispheres 306.4
1927 Female, age 91, both hemispheres 301.7
2246 Female, age 85, both hemispheres 290.0
2531 Female, age 67, both hemispheres 245.4
Entorhinal gyrus
nTPM: 300.3
2117 Female, age 91, right hemisphere 352.8
2764 Male, age 80, right hemisphere 334.2
1938 Female, age 85, left hemisphere 330.6
1787 Male, age 76, left hemisphere 295.1
2686 Male, age 75, right hemisphere 251.9
2613 Female, age 94, left hemisphere 237.5
Hippocampus, CA1
nTPM: 313.0
2749 Male, age 80, left hemisphere 367.5
2527 Male, age 74, both hemispheres 301.9
2082 Female, age 91, right hemisphere 300.5
2045 Male, age 76, both hemispheres 298.9
1873 Female, age 85, both hemispheres 296.1
Hippocampus, CA2
nTPM: 318.7
1963 Male, age 80, left hemisphere 354.3
2249 Male, age 74, both hemispheres 342.2
1892 Male, age 76, both hemispheres 320.0
1940 Female, age 85, left hemisphere 307.6
2113 Female, age 91, right hemisphere 300.7
2437 Female, age 94, left hemisphere 287.3
Hippocampus, CA3
nTPM: 300.2
1867 Male, age 76, both hemispheres 333.8
2436 Male, age 74, both hemispheres 330.9
2137 Male, age 80, left hemisphere 312.9
1891 Female, age 85, both hemispheres 310.9
2620 Female, age 94, left hemisphere 257.8
2861 Female, age 67, both hemispheres 254.7
Parahippocampal cortex
nTPM: 292.1
2018 Male, age 76, both hemispheres 342.5
1850 Male, age 80, both hemispheres 321.8
1933 Female, age 85, both hemispheres 309.0
2250 Female, age 67, right hemisphere 300.7
1990 Female, age 91, right hemisphere 298.9
2245 Female, age 91, both hemispheres 293.3
2692 Male, age 74, both hemispheres 281.3
2532 Female, age 72, left hemisphere 279.6
2693 Female, age 94, both hemispheres 254.7
2622 Female, age 67, right hemisphere 239.0
Perirhinal gyrus
nTPM: 316.4
1847 Female, age 91, left hemisphere 361.5
1794 Male, age 80, right hemisphere 344.6
1841 Female, age 85, right hemisphere 324.9
2848 Male, age 76, right hemisphere 285.2
2521 Female, age 94, right hemisphere 265.7
Subiculum
nTPM: 323.1
1901 Male, age 80, both hemispheres 346.1
2042 Male, age 76, both hemispheres 344.7
2619 Male, age 74, both hemispheres 321.9
1977 Female, age 85, both hemispheres 312.4
2438 Female, age 94, left hemisphere 309.7
2729 Female, age 91, right hemisphere 303.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 646.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 646.0
Samples: 197

Max nTPM: 1061.1
Min nTPM: 385.5
Std nTPM: 109.6
Median nTPM: 627.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1061.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1015.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 916.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 885.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 882.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 879.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 875.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 874.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 872.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 869.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 865.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 245.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 245.0
FF:10153-102I9 76 years, female 257.3
FF:10169-103B7 60 years, female 232.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 638.8
Pig sample Sample description nTPM
Subiculum
nTPM: 509.4
Samples: 4

Max nTPM: 676.1
Min nTPM: 393.0
Sample A Female 676.1
Sample B Female 491.5
Sample C Male 393.0
Sample D Male 476.8
Dorsal hippocampus
nTPM: 638.8
Samples: 4

Max nTPM: 858.6
Min nTPM: 449.1
Sample A Female 858.6
Sample B Female 550.4
Sample C Male 697.0
Sample D Male 449.1
Entorhinal cortex
nTPM: 470.5
Samples: 4

Max nTPM: 536.7
Min nTPM: 366.5
Sample A Female 471.3
Sample B Female 536.7
Sample C Male 507.4
Sample D Male 366.5
Ventral hippocampus
nTPM: 519.2
Samples: 4

Max nTPM: 573.7
Min nTPM: 397.7
Sample A Female 573.7
Sample B Female 397.7
Sample C Male 563.6
Sample D Male 541.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 238.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 220.7
Samples: 4

Max nTPM: 238.7
Min nTPM: 205.5
Sample A Male 205.5
Sample B Male 208.8
Sample C Female 238.7
Sample D Female 229.9
Hippocampal formation
nTPM: 238.8
Samples: 4

Max nTPM: 264.5
Min nTPM: 215.5
Sample A Male 264.5
Sample B Male 215.5
Sample C Female 250.5
Sample D Female 224.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.9
2245 Antisense, RP_040420_01_B03, Mouse strain C57BL/6J (56 days, male) 17.9
2246 Antisense, RP_040420_01_B03, Mouse strain C57BL/6J (56 days, male) 15.5

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