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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
34.6
nTPM
Monaco:
108.5
nTPM
Schmiedel:
284.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
34.6
HPA sample
nTPM
gdT-cell nTPM: 20.0
Samples: 6
Max nTPM: 33.6
Min nTPM: 5.4
P10809_1007
22.4
P10809_1022
18.0
P10809_1041
19.3
P10809_1060
5.4
P10809_1077
21.2
P10809_1098
33.6
MAIT T-cell nTPM: 28.0
Samples: 6
Max nTPM: 58.0
Min nTPM: 9.7
P10809_1006
41.2
P10809_1024
9.7
P10809_1043
24.1
P10809_1062
11.2
P10809_1083
23.9
P10809_1097
58.0
Memory CD4 T-cell nTPM: 14.7
Samples: 6
Max nTPM: 21.2
Min nTPM: 4.5
P10809_1014
21.2
P10809_1026
17.8
P10809_1045
18.3
P10809_1064
18.1
P10809_1086
8.3
P10809_1113
4.5
Memory CD8 T-cell nTPM: 34.6
Samples: 5
Max nTPM: 52.0
Min nTPM: 21.6
P10809_1012
40.7
P10809_1027
21.6
P10809_1046
33.4
P10809_1065
25.4
P10809_1111
52.0
Naive CD4 T-cell nTPM: 17.4
Samples: 6
Max nTPM: 20.5
Min nTPM: 10.7
P10809_1015
19.9
P10809_1030
19.2
P10809_1049
14.6
P10809_1068
20.5
P10809_1085
19.2
P10809_1112
10.7
Naive CD8 T-cell nTPM: 26.1
Samples: 6
Max nTPM: 32.4
Min nTPM: 6.7
P10809_1016
29.5
P10809_1031
30.4
P10809_1050
25.6
P10809_1069
32.4
P10809_1087
6.7
P10809_1110
31.8
T-reg nTPM: 26.3
Samples: 6
Max nTPM: 33.9
Min nTPM: 6.7
P10809_1018
24.4
P10809_1037
30.5
P10809_1056
33.9
P10809_1075
33.6
P10809_1094
6.7
P10809_1106
28.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
108.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 73.9
Samples: 4
Max nTPM: 128.5
Min nTPM: 13.2
RHH5202_R3573
13.2
RHH5230_R3602
100.1
RHH5259_R3631
128.5
RHH5288_R3660
53.6
Effector memory CD8 T-cell nTPM: 88.1
Samples: 4
Max nTPM: 116.7
Min nTPM: 39.7
RHH5203_R3574
84.0
RHH5231_R3603
111.9
RHH5260_R3632
116.7
RHH5289_R3661
39.7
MAIT T-cell nTPM: 73.7
Samples: 4
Max nTPM: 100.7
Min nTPM: 48.7
RHH5233_R3605
48.7
RHH5205_R3576
100.7
RHH5262_R3634
91.3
RHH5297_R3663
53.9
Memory CD4 T-cell TFH nTPM: 39.5
Samples: 4
Max nTPM: 65.5
Min nTPM: 2.1
RHH5300_R3666
48.3
RHH5236_R3608
65.5
RHH5265_R3637
42.1
RHH5208_R3579
2.1
Memory CD4 T-cell Th1 nTPM: 50.2
Samples: 4
Max nTPM: 81.8
Min nTPM: 26.9
RHH5210_R3581
37.3
RHH5302_R3668
26.9
RHH5238_R3610
54.6
RHH5267_R3639
81.8
Memory CD4 T-cell Th1/Th17 nTPM: 48.1
Samples: 4
Max nTPM: 68.7
Min nTPM: 13.8
RHH5303_R3669
13.8
RHH5211_R3582
54.0
RHH5239_R3611
68.7
RHH5268_R3640
55.8
Memory CD4 T-cell Th17 nTPM: 42.3
Samples: 4
Max nTPM: 62.5
Min nTPM: 16.1
RHH5304_R3670
16.1
RHH5212_R3583
62.5
RHH5240_R3612
31.2
RHH5269_R3641
59.4
Memory CD4 T-cell Th2 nTPM: 38.7
Samples: 4
Max nTPM: 53.8
Min nTPM: 13.3
RHH5305_R3671
47.1
RHH5213_R3584
40.4
RHH5241_R3613
13.3
RHH5270_R3642
53.8
Naive CD4 T-cell nTPM: 38.9
Samples: 4
Max nTPM: 59.9
Min nTPM: 21.2
RHH5306_R3672
37.3
RHH5214_R3585
37.0
RHH5242_R3614
21.2
RHH5271_R3643
59.9
Naive CD8 T-cell nTPM: 49.2
Samples: 4
Max nTPM: 70.0
Min nTPM: 2.3
RHH5201_R3572
2.3
RHH5229_R3601
70.0
RHH5258_R3630
55.6
RHH5287_R3659
68.7
Non-Vd2 gdTCR nTPM: 65.8
Samples: 4
Max nTPM: 114.5
Min nTPM: 33.5
RHH5235_R3607
114.5
RHH5264_R3636
34.5
RHH5207_R3578
33.5
RHH5299_R3665
80.5
T-reg nTPM: 81.8
Samples: 4
Max nTPM: 100.7
Min nTPM: 61.9
RHH5301_R3667
61.9
RHH5237_R3609
91.3
RHH5266_R3638
100.7
RHH5209_R3580
73.3
Terminal effector memory CD4 T-cell nTPM: 44.6
Samples: 2
Max nTPM: 58.3
Min nTPM: 30.9
RHH5243_R3615
58.3
RHH5272_R3644
30.9
Terminal effector memory CD8 T-cell nTPM: 68.3
Samples: 4
Max nTPM: 128.6
Min nTPM: 27.3
RHH5232_R3604
57.9
RHH5204_R3575
59.2
RHH5261_R3633
128.6
RHH5296_R3662
27.3
Vd2 gdTCR nTPM: 108.6
Samples: 4
Max nTPM: 128.8
Min nTPM: 89.6
RHH5234_R3606
115.1
RHH5206_R3577
89.6
RHH5263_R3635
128.8
RHH5298_R3664
100.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
