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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
94.7
nTPM
Monaco:
279.1
nTPM
Schmiedel:
148.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
94.7
HPA sample
nTPM
gdT-cell nTPM: 61.5
Samples: 6
Max nTPM: 78.7
Min nTPM: 44.3
P10809_1007
48.0
P10809_1022
75.3
P10809_1041
59.5
P10809_1060
44.3
P10809_1077
63.1
P10809_1098
78.7
MAIT T-cell nTPM: 94.7
Samples: 6
Max nTPM: 113.2
Min nTPM: 75.7
P10809_1006
87.3
P10809_1024
113.2
P10809_1043
75.7
P10809_1062
80.4
P10809_1083
106.0
P10809_1097
105.8
Memory CD4 T-cell nTPM: 59.5
Samples: 6
Max nTPM: 85.7
Min nTPM: 42.0
P10809_1014
53.1
P10809_1026
42.0
P10809_1045
55.2
P10809_1064
52.1
P10809_1086
85.7
P10809_1113
68.8
Memory CD8 T-cell nTPM: 59.8
Samples: 5
Max nTPM: 74.5
Min nTPM: 52.8
P10809_1012
54.3
P10809_1027
54.5
P10809_1046
52.8
P10809_1065
63.1
P10809_1111
74.5
Naive CD4 T-cell nTPM: 52.6
Samples: 6
Max nTPM: 70.0
Min nTPM: 38.2
P10809_1015
52.0
P10809_1030
43.8
P10809_1049
38.2
P10809_1068
54.7
P10809_1085
70.0
P10809_1112
57.0
Naive CD8 T-cell nTPM: 56.6
Samples: 6
Max nTPM: 86.3
Min nTPM: 42.2
P10809_1016
42.2
P10809_1031
45.6
P10809_1050
50.1
P10809_1069
61.3
P10809_1087
86.3
P10809_1110
54.2
T-reg nTPM: 38.6
Samples: 6
Max nTPM: 44.3
Min nTPM: 33.0
P10809_1018
40.2
P10809_1037
40.1
P10809_1056
34.0
P10809_1075
33.0
P10809_1094
40.2
P10809_1106
44.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
279.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 199.1
Samples: 4
Max nTPM: 241.4
Min nTPM: 179.8
RHH5202_R3573
183.9
RHH5230_R3602
179.8
RHH5259_R3631
241.4
RHH5288_R3660
191.2
Effector memory CD8 T-cell nTPM: 199.4
Samples: 4
Max nTPM: 257.2
Min nTPM: 162.0
RHH5203_R3574
162.0
RHH5231_R3603
172.5
RHH5260_R3632
205.9
RHH5289_R3661
257.2
MAIT T-cell nTPM: 279.1
Samples: 4
Max nTPM: 298.6
Min nTPM: 264.9
RHH5233_R3605
282.3
RHH5205_R3576
298.6
RHH5262_R3634
270.5
RHH5297_R3663
264.9
Memory CD4 T-cell TFH nTPM: 154.9
Samples: 4
Max nTPM: 170.7
Min nTPM: 136.0
RHH5300_R3666
146.3
RHH5236_R3608
170.7
RHH5265_R3637
166.5
RHH5208_R3579
136.0
Memory CD4 T-cell Th1 nTPM: 173.3
Samples: 4
Max nTPM: 196.9
Min nTPM: 156.9
RHH5210_R3581
163.2
RHH5302_R3668
176.3
RHH5238_R3610
196.9
RHH5267_R3639
156.9
Memory CD4 T-cell Th1/Th17 nTPM: 256.1
Samples: 4
Max nTPM: 322.9
Min nTPM: 182.0
RHH5303_R3669
285.4
RHH5211_R3582
234.0
RHH5239_R3611
322.9
RHH5268_R3640
182.0
Memory CD4 T-cell Th17 nTPM: 233.7
Samples: 4
Max nTPM: 271.3
Min nTPM: 186.0
RHH5304_R3670
271.3
RHH5212_R3583
186.0
RHH5240_R3612
266.1
RHH5269_R3641
211.2
Memory CD4 T-cell Th2 nTPM: 222.2
Samples: 4
Max nTPM: 249.4
Min nTPM: 207.8
RHH5305_R3671
209.9
RHH5213_R3584
249.4
RHH5241_R3613
221.7
RHH5270_R3642
207.8
Naive CD4 T-cell nTPM: 175.7
Samples: 4
Max nTPM: 184.8
Min nTPM: 159.9
RHH5306_R3672
178.1
RHH5214_R3585
179.9
RHH5242_R3614
184.8
RHH5271_R3643
159.9
Naive CD8 T-cell nTPM: 155.8
Samples: 4
Max nTPM: 201.7
Min nTPM: 111.3
RHH5201_R3572
151.5
RHH5229_R3601
201.7
RHH5258_R3630
111.3
RHH5287_R3659
158.5
Non-Vd2 gdTCR nTPM: 208.3
Samples: 4
Max nTPM: 221.4
Min nTPM: 193.4
RHH5235_R3607
205.3
RHH5264_R3636
213.0
RHH5207_R3578
221.4
RHH5299_R3665
193.4
T-reg nTPM: 156.0
Samples: 4
Max nTPM: 194.7
Min nTPM: 121.9
RHH5301_R3667
140.2
RHH5237_R3609
194.7
RHH5266_R3638
121.9
RHH5209_R3580
167.3
Terminal effector memory CD4 T-cell nTPM: 224.0
Samples: 2
Max nTPM: 226.2
Min nTPM: 221.7
RHH5243_R3615
221.7
RHH5272_R3644
226.2
Terminal effector memory CD8 T-cell nTPM: 214.7
Samples: 4
Max nTPM: 240.7
Min nTPM: 186.1
RHH5232_R3604
216.2
RHH5204_R3575
186.1
RHH5261_R3633
215.7
RHH5296_R3662
240.7
Vd2 gdTCR nTPM: 229.1
Samples: 4
Max nTPM: 270.1
Min nTPM: 211.1
RHH5234_R3606
219.7
RHH5206_R3577
211.1
RHH5263_R3635
270.1
RHH5298_R3664
215.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
