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TCAF2
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  • TCAF2
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

TCAF2
Synonyms FAM115C, FAM139A, FLJ40722, GATD9B
Gene descriptioni

Full gene name according to HGNC.

TRPM8 channel associated factor 2
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 7
Cytoband q35
Chromosome location (bp) 143620952 - 143730410
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000170379 (version 109)
Entrez gene 285966
HGNC HGNC:26878
UniProt A6NFQ2 (UniProt - Evidence at protein level)
neXtProt NX_A6NFQ2
GeneCards TCAF2
Antibodypedia TCAF2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

[Isoform 2]: Negatively regulates the plasma membrane cation channel TRPM8 activity. Involved in the recruitment of TRPM8 to the cell surface. Promotes prostate cancer cell migration stimulation in a TRPM8-dependent manner.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables transmembrane transporter binding activity. Involved in negative regulation of anion channel activity; positive regulation of cell migration; and positive regulation of protein targeting to membrane. Located in cell junction and plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
TCAF2-201
ENSP00000349902
ENST00000357344
A6NFQ2
[Direct mapping] TRPM8 channel-associated factor 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005886 [plasma membrane]
GO:0010359 [regulation of anion channel activity]
GO:0010360 [negative regulation of anion channel activity]
GO:0016020 [membrane]
GO:0030054 [cell junction]
GO:0030335 [positive regulation of cell migration]
GO:0044325 [transmembrane transporter binding]
GO:0090314 [positive regulation of protein targeting to membrane]
Show all
845 aa
92 kDa
No 0
TCAF2-202
ENSP00000389100
ENST00000411935
A6NFQ2
[Direct mapping] TRPM8 channel-associated factor 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005886 [plasma membrane]
GO:0010359 [regulation of anion channel activity]
GO:0010360 [negative regulation of anion channel activity]
GO:0016020 [membrane]
GO:0030054 [cell junction]
GO:0030335 [positive regulation of cell migration]
GO:0044325 [transmembrane transporter binding]
GO:0090314 [positive regulation of protein targeting to membrane]
Show all
815 aa
90.6 kDa
No 0
TCAF2-203
ENSP00000441099
ENST00000425618
A6NFQ2
[Direct mapping] TRPM8 channel-associated factor 2
Show all
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005886 [plasma membrane]
GO:0010359 [regulation of anion channel activity]
GO:0010360 [negative regulation of anion channel activity]
GO:0016020 [membrane]
GO:0030054 [cell junction]
GO:0030335 [positive regulation of cell migration]
GO:0044325 [transmembrane transporter binding]
GO:0090314 [positive regulation of protein targeting to membrane]
Show all
815 aa
90.6 kDa
No 0
TCAF2-204
ENSP00000404265
ENST00000441159
A6NFQ2
[Direct mapping] TRPM8 channel-associated factor 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005886 [plasma membrane]
GO:0010359 [regulation of anion channel activity]
GO:0010360 [negative regulation of anion channel activity]
GO:0016020 [membrane]
GO:0030054 [cell junction]
GO:0030335 [positive regulation of cell migration]
GO:0044325 [transmembrane transporter binding]
GO:0090314 [positive regulation of protein targeting to membrane]
Show all
919 aa
100.9 kDa
No 0
TCAF2-205
ENSP00000412724
ENST00000444908
A6NFQ2
[Direct mapping] TRPM8 channel-associated factor 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005886 [plasma membrane]
GO:0010359 [regulation of anion channel activity]
GO:0010360 [negative regulation of anion channel activity]
GO:0016020 [membrane]
GO:0030054 [cell junction]
GO:0030335 [positive regulation of cell migration]
GO:0044325 [transmembrane transporter binding]
GO:0090314 [positive regulation of protein targeting to membrane]
Show all
845 aa
92 kDa
No 0
TCAF2-206
ENSP00000431079
ENST00000518791
Q8N1I1
[Direct mapping] TRPM8 channel-associated factor 2; cDNA FLJ40722 fis, clone THYMU2028629
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005886 [plasma membrane]
GO:0030054 [cell junction]
Show all
564 aa
62.1 kDa
No 0
TCAF2-207
ENSP00000495809
ENST00000643242
A6NFQ2
[Direct mapping] TRPM8 channel-associated factor 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005886 [plasma membrane]
GO:0010359 [regulation of anion channel activity]
GO:0010360 [negative regulation of anion channel activity]
GO:0016020 [membrane]
GO:0030054 [cell junction]
GO:0030335 [positive regulation of cell migration]
GO:0044325 [transmembrane transporter binding]
GO:0090314 [positive regulation of protein targeting to membrane]
Show all
845 aa
92 kDa
No 0
TCAF2-208
ENSP00000506869
ENST00000684770
A6NFQ2
[Direct mapping] TRPM8 channel-associated factor 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005886 [plasma membrane]
GO:0010359 [regulation of anion channel activity]
GO:0010360 [negative regulation of anion channel activity]
GO:0016020 [membrane]
GO:0030054 [cell junction]
GO:0030335 [positive regulation of cell migration]
GO:0044325 [transmembrane transporter binding]
GO:0090314 [positive regulation of protein targeting to membrane]
Show all
919 aa
100.9 kDa
No 0

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