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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
175.1
nTPM
Monaco:
317.9
nTPM
Schmiedel:
237.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
175.1
HPA sample
nTPM
gdT-cell nTPM: 130.3
Samples: 6
Max nTPM: 165.6
Min nTPM: 96.5
P10809_1007
116.3
P10809_1022
158.2
P10809_1041
165.6
P10809_1060
120.2
P10809_1077
96.5
P10809_1098
124.7
MAIT T-cell nTPM: 175.1
Samples: 6
Max nTPM: 216.8
Min nTPM: 133.6
P10809_1006
133.6
P10809_1024
216.8
P10809_1043
181.1
P10809_1062
177.6
P10809_1083
156.0
P10809_1097
185.3
Memory CD4 T-cell nTPM: 137.2
Samples: 6
Max nTPM: 164.3
Min nTPM: 115.4
P10809_1014
124.3
P10809_1026
152.9
P10809_1045
164.3
P10809_1064
132.5
P10809_1086
115.4
P10809_1113
133.7
Memory CD8 T-cell nTPM: 141.4
Samples: 5
Max nTPM: 169.3
Min nTPM: 113.8
P10809_1012
126.9
P10809_1027
151.9
P10809_1046
169.3
P10809_1065
113.8
P10809_1111
144.9
Naive CD4 T-cell nTPM: 130.1
Samples: 6
Max nTPM: 156.5
Min nTPM: 108.8
P10809_1015
114.7
P10809_1030
156.5
P10809_1049
129.4
P10809_1068
145.1
P10809_1085
108.8
P10809_1112
126.0
Naive CD8 T-cell nTPM: 131.6
Samples: 6
Max nTPM: 143.4
Min nTPM: 109.4
P10809_1016
129.2
P10809_1031
139.7
P10809_1050
143.4
P10809_1069
139.2
P10809_1087
109.4
P10809_1110
128.4
T-reg nTPM: 171.4
Samples: 6
Max nTPM: 217.6
Min nTPM: 122.7
P10809_1018
122.7
P10809_1037
184.7
P10809_1056
197.8
P10809_1075
132.8
P10809_1094
217.6
P10809_1106
172.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
317.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 274.4
Samples: 4
Max nTPM: 343.2
Min nTPM: 174.8
RHH5202_R3573
343.2
RHH5230_R3602
292.7
RHH5259_R3631
174.8
RHH5288_R3660
286.9
Effector memory CD8 T-cell nTPM: 309.0
Samples: 4
Max nTPM: 357.3
Min nTPM: 260.4
RHH5203_R3574
321.0
RHH5231_R3603
357.3
RHH5260_R3632
260.4
RHH5289_R3661
297.4
MAIT T-cell nTPM: 317.9
Samples: 4
Max nTPM: 404.7
Min nTPM: 267.2
RHH5233_R3605
404.7
RHH5205_R3576
267.2
RHH5262_R3634
299.5
RHH5297_R3663
300.3
Memory CD4 T-cell TFH nTPM: 281.8
Samples: 4
Max nTPM: 320.0
Min nTPM: 246.8
RHH5300_R3666
246.8
RHH5236_R3608
255.2
RHH5265_R3637
305.3
RHH5208_R3579
320.0
Memory CD4 T-cell Th1 nTPM: 258.1
Samples: 4
Max nTPM: 309.9
Min nTPM: 223.0
RHH5210_R3581
271.7
RHH5302_R3668
309.9
RHH5238_R3610
223.0
RHH5267_R3639
227.7
Memory CD4 T-cell Th1/Th17 nTPM: 258.9
Samples: 4
Max nTPM: 322.3
Min nTPM: 192.6
RHH5303_R3669
322.3
RHH5211_R3582
269.1
RHH5239_R3611
192.6
RHH5268_R3640
251.7
Memory CD4 T-cell Th17 nTPM: 257.0
Samples: 4
Max nTPM: 279.0
Min nTPM: 238.0
RHH5304_R3670
267.7
RHH5212_R3583
243.1
RHH5240_R3612
279.0
RHH5269_R3641
238.0
Memory CD4 T-cell Th2 nTPM: 282.6
Samples: 4
Max nTPM: 302.8
Min nTPM: 239.4
RHH5305_R3671
302.4
RHH5213_R3584
285.6
RHH5241_R3613
302.8
RHH5270_R3642
239.4
Naive CD4 T-cell nTPM: 293.4
Samples: 4
Max nTPM: 312.0
Min nTPM: 271.9
RHH5306_R3672
312.0
RHH5214_R3585
297.6
RHH5242_R3614
271.9
RHH5271_R3643
292.0
Naive CD8 T-cell nTPM: 317.3
Samples: 4
Max nTPM: 405.6
Min nTPM: 225.0
RHH5201_R3572
405.6
RHH5229_R3601
225.0
RHH5258_R3630
364.8
RHH5287_R3659
273.6
Non-Vd2 gdTCR nTPM: 277.6
Samples: 4
Max nTPM: 304.7
Min nTPM: 236.1
RHH5235_R3607
236.1
RHH5264_R3636
300.9
RHH5207_R3578
304.7
RHH5299_R3665
268.7
T-reg nTPM: 269.0
Samples: 4
Max nTPM: 300.8
Min nTPM: 241.3
RHH5301_R3667
277.7
RHH5237_R3609
300.8
RHH5266_R3638
241.3
RHH5209_R3580
256.3
Terminal effector memory CD4 T-cell nTPM: 218.0
Samples: 2
Max nTPM: 262.7
Min nTPM: 173.3
RHH5243_R3615
173.3
RHH5272_R3644
262.7
Terminal effector memory CD8 T-cell nTPM: 310.7
Samples: 4
Max nTPM: 349.8
Min nTPM: 280.9
RHH5232_R3604
302.9
RHH5204_R3575
309.1
RHH5261_R3633
280.9
RHH5296_R3662
349.8
Vd2 gdTCR nTPM: 291.0
Samples: 4
Max nTPM: 345.4
Min nTPM: 236.0
RHH5234_R3606
313.7
RHH5206_R3577
345.4
RHH5263_R3635
236.0
RHH5298_R3664
268.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.