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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
282.5
nTPM
Monaco:
507.6
nTPM
Schmiedel:
133.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
282.5
HPA sample
nTPM
gdT-cell nTPM: 179.9
Samples: 6
Max nTPM: 231.0
Min nTPM: 123.6
P10809_1007
123.6
P10809_1022
206.7
P10809_1041
186.5
P10809_1060
166.7
P10809_1077
231.0
P10809_1098
165.1
MAIT T-cell nTPM: 167.3
Samples: 6
Max nTPM: 213.1
Min nTPM: 131.7
P10809_1006
131.7
P10809_1024
213.1
P10809_1043
143.5
P10809_1062
179.7
P10809_1083
176.3
P10809_1097
159.5
Memory CD4 T-cell nTPM: 159.5
Samples: 6
Max nTPM: 224.2
Min nTPM: 116.7
P10809_1014
116.7
P10809_1026
138.0
P10809_1045
145.3
P10809_1064
181.4
P10809_1086
224.2
P10809_1113
151.3
Memory CD8 T-cell nTPM: 199.2
Samples: 5
Max nTPM: 239.7
Min nTPM: 141.3
P10809_1012
141.3
P10809_1027
239.7
P10809_1046
164.9
P10809_1065
234.4
P10809_1111
215.6
Naive CD4 T-cell nTPM: 138.4
Samples: 6
Max nTPM: 200.7
Min nTPM: 102.6
P10809_1015
102.6
P10809_1030
139.2
P10809_1049
114.0
P10809_1068
154.0
P10809_1085
200.7
P10809_1112
119.6
Naive CD8 T-cell nTPM: 167.0
Samples: 6
Max nTPM: 266.5
Min nTPM: 89.6
P10809_1016
89.6
P10809_1031
165.4
P10809_1050
129.5
P10809_1069
224.7
P10809_1087
266.5
P10809_1110
126.3
T-reg nTPM: 282.5
Samples: 6
Max nTPM: 333.8
Min nTPM: 174.4
P10809_1018
174.4
P10809_1037
302.4
P10809_1056
333.8
P10809_1075
330.0
P10809_1094
318.7
P10809_1106
235.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
507.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 281.5
Samples: 4
Max nTPM: 332.9
Min nTPM: 226.5
RHH5202_R3573
294.4
RHH5230_R3602
332.9
RHH5259_R3631
272.2
RHH5288_R3660
226.5
Effector memory CD8 T-cell nTPM: 507.6
Samples: 4
Max nTPM: 569.3
Min nTPM: 456.1
RHH5203_R3574
541.1
RHH5231_R3603
569.3
RHH5260_R3632
456.1
RHH5289_R3661
463.7
MAIT T-cell nTPM: 317.7
Samples: 4
Max nTPM: 432.7
Min nTPM: 222.7
RHH5233_R3605
333.2
RHH5205_R3576
432.7
RHH5262_R3634
282.2
RHH5297_R3663
222.7
Memory CD4 T-cell TFH nTPM: 266.7
Samples: 4
Max nTPM: 324.8
Min nTPM: 197.8
RHH5300_R3666
197.8
RHH5236_R3608
324.8
RHH5265_R3637
247.1
RHH5208_R3579
297.2
Memory CD4 T-cell Th1 nTPM: 251.3
Samples: 4
Max nTPM: 304.2
Min nTPM: 203.8
RHH5210_R3581
224.4
RHH5302_R3668
203.8
RHH5238_R3610
272.7
RHH5267_R3639
304.2
Memory CD4 T-cell Th1/Th17 nTPM: 258.8
Samples: 4
Max nTPM: 278.4
Min nTPM: 229.5
RHH5303_R3669
259.2
RHH5211_R3582
268.1
RHH5239_R3611
278.4
RHH5268_R3640
229.5
Memory CD4 T-cell Th17 nTPM: 281.2
Samples: 4
Max nTPM: 333.4
Min nTPM: 241.5
RHH5304_R3670
271.5
RHH5212_R3583
278.5
RHH5240_R3612
333.4
RHH5269_R3641
241.5
Memory CD4 T-cell Th2 nTPM: 246.7
Samples: 4
Max nTPM: 268.0
Min nTPM: 190.9
RHH5305_R3671
190.9
RHH5213_R3584
267.3
RHH5241_R3613
260.5
RHH5270_R3642
268.0
Naive CD4 T-cell nTPM: 199.1
Samples: 4
Max nTPM: 237.4
Min nTPM: 174.0
RHH5306_R3672
179.6
RHH5214_R3585
205.3
RHH5242_R3614
174.0
RHH5271_R3643
237.4
Naive CD8 T-cell nTPM: 209.2
Samples: 4
Max nTPM: 239.9
Min nTPM: 185.2
RHH5201_R3572
239.9
RHH5229_R3601
196.7
RHH5258_R3630
185.2
RHH5287_R3659
215.0
Non-Vd2 gdTCR nTPM: 408.1
Samples: 4
Max nTPM: 513.3
Min nTPM: 318.6
RHH5235_R3607
411.2
RHH5264_R3636
389.2
RHH5207_R3578
513.3
RHH5299_R3665
318.6
T-reg nTPM: 278.0
Samples: 4
Max nTPM: 342.9
Min nTPM: 207.3
RHH5301_R3667
207.3
RHH5237_R3609
342.9
RHH5266_R3638
280.9
RHH5209_R3580
281.0
Terminal effector memory CD4 T-cell nTPM: 386.5
Samples: 2
Max nTPM: 395.3
Min nTPM: 377.7
RHH5243_R3615
395.3
RHH5272_R3644
377.7
Terminal effector memory CD8 T-cell nTPM: 419.6
Samples: 4
Max nTPM: 466.8
Min nTPM: 350.7
RHH5232_R3604
466.8
RHH5204_R3575
415.2
RHH5261_R3633
445.5
RHH5296_R3662
350.7
Vd2 gdTCR nTPM: 345.3
Samples: 4
Max nTPM: 458.5
Min nTPM: 211.9
RHH5234_R3606
304.3
RHH5206_R3577
458.5
RHH5263_R3635
406.4
RHH5298_R3664
211.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
