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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
43.3
nTPM
Monaco:
163.9
nTPM
Schmiedel:
810.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
43.3
HPA sample
nTPM
gdT-cell nTPM: 43.4
Samples: 6
Max nTPM: 63.0
Min nTPM: 31.0
P10809_1007
31.2
P10809_1022
31.0
P10809_1041
42.4
P10809_1060
48.6
P10809_1077
63.0
P10809_1098
43.9
MAIT T-cell nTPM: 36.1
Samples: 6
Max nTPM: 47.2
Min nTPM: 26.2
P10809_1006
26.2
P10809_1024
35.8
P10809_1043
42.5
P10809_1062
30.8
P10809_1083
47.2
P10809_1097
33.9
Memory CD4 T-cell nTPM: 31.1
Samples: 6
Max nTPM: 48.3
Min nTPM: 18.6
P10809_1014
20.6
P10809_1026
18.6
P10809_1045
31.0
P10809_1064
26.0
P10809_1086
48.3
P10809_1113
42.2
Memory CD8 T-cell nTPM: 41.3
Samples: 5
Max nTPM: 52.2
Min nTPM: 32.2
P10809_1012
32.2
P10809_1027
34.1
P10809_1046
36.6
P10809_1065
52.2
P10809_1111
51.6
Naive CD4 T-cell nTPM: 28.5
Samples: 6
Max nTPM: 43.3
Min nTPM: 16.3
P10809_1015
16.3
P10809_1030
20.4
P10809_1049
34.1
P10809_1068
22.4
P10809_1085
43.3
P10809_1112
34.6
Naive CD8 T-cell nTPM: 41.2
Samples: 6
Max nTPM: 71.8
Min nTPM: 18.6
P10809_1016
18.6
P10809_1031
22.6
P10809_1050
56.6
P10809_1069
41.2
P10809_1087
71.8
P10809_1110
36.5
T-reg nTPM: 35.5
Samples: 6
Max nTPM: 48.4
Min nTPM: 27.0
P10809_1018
27.0
P10809_1037
30.2
P10809_1056
39.4
P10809_1075
34.2
P10809_1094
48.4
P10809_1106
33.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
163.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 148.6
Samples: 4
Max nTPM: 180.4
Min nTPM: 128.5
RHH5202_R3573
128.5
RHH5230_R3602
135.7
RHH5259_R3631
180.4
RHH5288_R3660
149.7
Effector memory CD8 T-cell nTPM: 157.9
Samples: 4
Max nTPM: 212.3
Min nTPM: 127.4
RHH5203_R3574
161.2
RHH5231_R3603
127.4
RHH5260_R3632
130.5
RHH5289_R3661
212.3
MAIT T-cell nTPM: 127.7
Samples: 4
Max nTPM: 134.7
Min nTPM: 117.0
RHH5233_R3605
117.0
RHH5205_R3576
134.7
RHH5262_R3634
129.4
RHH5297_R3663
129.7
Memory CD4 T-cell TFH nTPM: 105.6
Samples: 4
Max nTPM: 116.0
Min nTPM: 89.8
RHH5300_R3666
110.7
RHH5236_R3608
89.8
RHH5265_R3637
106.0
RHH5208_R3579
116.0
Memory CD4 T-cell Th1 nTPM: 124.5
Samples: 4
Max nTPM: 133.6
Min nTPM: 112.4
RHH5210_R3581
112.4
RHH5302_R3668
133.6
RHH5238_R3610
123.1
RHH5267_R3639
128.8
Memory CD4 T-cell Th1/Th17 nTPM: 119.2
Samples: 4
Max nTPM: 142.7
Min nTPM: 104.7
RHH5303_R3669
142.7
RHH5211_R3582
104.7
RHH5239_R3611
111.5
RHH5268_R3640
117.8
Memory CD4 T-cell Th17 nTPM: 119.5
Samples: 4
Max nTPM: 156.3
Min nTPM: 102.4
RHH5304_R3670
156.3
RHH5212_R3583
102.4
RHH5240_R3612
108.5
RHH5269_R3641
110.7
Memory CD4 T-cell Th2 nTPM: 100.8
Samples: 4
Max nTPM: 127.0
Min nTPM: 76.6
RHH5305_R3671
127.0
RHH5213_R3584
76.6
RHH5241_R3613
100.5
RHH5270_R3642
99.0
Naive CD4 T-cell nTPM: 124.1
Samples: 4
Max nTPM: 165.9
Min nTPM: 81.0
RHH5306_R3672
165.9
RHH5214_R3585
95.2
RHH5242_R3614
81.0
RHH5271_R3643
154.3
Naive CD8 T-cell nTPM: 150.9
Samples: 4
Max nTPM: 192.7
Min nTPM: 117.8
RHH5201_R3572
117.8
RHH5229_R3601
157.8
RHH5258_R3630
135.2
RHH5287_R3659
192.7
Non-Vd2 gdTCR nTPM: 145.3
Samples: 4
Max nTPM: 152.9
Min nTPM: 139.6
RHH5235_R3607
140.3
RHH5264_R3636
139.6
RHH5207_R3578
152.9
RHH5299_R3665
148.2
T-reg nTPM: 117.9
Samples: 4
Max nTPM: 130.6
Min nTPM: 101.4
RHH5301_R3667
130.6
RHH5237_R3609
101.4
RHH5266_R3638
119.7
RHH5209_R3580
119.9
Terminal effector memory CD4 T-cell nTPM: 120.5
Samples: 2
Max nTPM: 143.1
Min nTPM: 97.9
RHH5243_R3615
143.1
RHH5272_R3644
97.9
Terminal effector memory CD8 T-cell nTPM: 163.9
Samples: 4
Max nTPM: 195.3
Min nTPM: 148.1
RHH5232_R3604
148.1
RHH5204_R3575
161.8
RHH5261_R3633
150.3
RHH5296_R3662
195.3
Vd2 gdTCR nTPM: 138.5
Samples: 4
Max nTPM: 174.8
Min nTPM: 119.9
RHH5234_R3606
119.9
RHH5206_R3577
174.8
RHH5263_R3635
136.9
RHH5298_R3664
122.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
