HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:22.6 nTPM
HPA Brain:177.7 nTPM
GTEx:22.6 nTPM
FANTOM5:157.8 Scaled Tags Per Million
Pig:115.0 nTPM
Mouse:202.4 nTPM
Allen mouse:22.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 177.7
Sample id Sample description nTPM
Hippocampus
nTPM: 134.0
2621 Female, age 67, right hemisphere 171.6
1898 Male, age 80, left hemisphere 146.9
2148 Female, age 91, left hemisphere 142.4
1855 Male, age 76, left hemisphere 127.1
2529 Female, age 94, left hemisphere 113.1
1911 Female, age 85, right hemisphere 103.1
Dentate gyrus
nTPM: 127.5
1927 Female, age 91, both hemispheres 168.0
2531 Female, age 67, both hemispheres 162.8
2010 Male, age 76, both hemispheres 125.1
2246 Female, age 85, both hemispheres 116.7
2530 Female, age 94, left hemisphere 109.5
2528 Male, age 74, both hemispheres 83.1
Entorhinal gyrus
nTPM: 137.1
2613 Female, age 94, left hemisphere 202.2
2764 Male, age 80, right hemisphere 153.8
1787 Male, age 76, left hemisphere 144.4
1938 Female, age 85, left hemisphere 125.0
2686 Male, age 75, right hemisphere 120.8
2117 Female, age 91, right hemisphere 76.7
Hippocampus, CA1
nTPM: 158.1
2749 Male, age 80, left hemisphere 237.9
1873 Female, age 85, both hemispheres 144.4
2045 Male, age 76, both hemispheres 144.2
2527 Male, age 74, both hemispheres 141.6
2082 Female, age 91, right hemisphere 122.7
Hippocampus, CA2
nTPM: 121.0
1963 Male, age 80, left hemisphere 154.1
1892 Male, age 76, both hemispheres 144.3
2113 Female, age 91, right hemisphere 127.2
2437 Female, age 94, left hemisphere 110.6
2249 Male, age 74, both hemispheres 95.3
1940 Female, age 85, left hemisphere 94.3
Hippocampus, CA3
nTPM: 146.3
2620 Female, age 94, left hemisphere 205.0
2137 Male, age 80, left hemisphere 201.1
2861 Female, age 67, both hemispheres 173.9
1867 Male, age 76, both hemispheres 112.2
2436 Male, age 74, both hemispheres 94.9
1891 Female, age 85, both hemispheres 90.8
Parahippocampal cortex
nTPM: 140.7
2245 Female, age 91, both hemispheres 206.0
1850 Male, age 80, both hemispheres 161.9
2693 Female, age 94, both hemispheres 145.6
2532 Female, age 72, left hemisphere 144.3
2250 Female, age 67, right hemisphere 144.0
1990 Female, age 91, right hemisphere 142.1
2622 Female, age 67, right hemisphere 137.4
1933 Female, age 85, both hemispheres 129.4
2018 Male, age 76, both hemispheres 109.7
2692 Male, age 74, both hemispheres 86.9
Perirhinal gyrus
nTPM: 177.7
1847 Female, age 91, left hemisphere 200.2
1794 Male, age 80, right hemisphere 189.9
2521 Female, age 94, right hemisphere 181.0
1841 Female, age 85, right hemisphere 160.1
2848 Male, age 76, right hemisphere 157.1
Subiculum
nTPM: 98.8
1977 Female, age 85, both hemispheres 121.5
1901 Male, age 80, both hemispheres 115.2
2438 Female, age 94, left hemisphere 98.4
2619 Male, age 74, both hemispheres 93.9
2729 Female, age 91, right hemisphere 88.7
2042 Male, age 76, both hemispheres 74.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.6
Samples: 197

Max nTPM: 66.0
Min nTPM: 0.7
Std nTPM: 15.3
Median nTPM: 19.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 66.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 64.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 64.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 61.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 59.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 57.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 54.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 52.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 51.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 49.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 48.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 157.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 157.8
FF:10169-103B7 60 years, female 176.5
FF:10153-102I9 76 years, female 139.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 115.0
Pig sample Sample description nTPM
Subiculum
nTPM: 78.7
Samples: 4

Max nTPM: 105.4
Min nTPM: 65.8
Sample A Female 105.4
Sample B Female 67.1
Sample C Male 76.5
Sample D Male 65.8
Dorsal hippocampus
nTPM: 100.0
Samples: 4

Max nTPM: 120.0
Min nTPM: 83.3
Sample A Female 120.0
Sample B Female 107.3
Sample C Male 83.3
Sample D Male 89.2
Entorhinal cortex
nTPM: 115.0
Samples: 4

Max nTPM: 118.3
Min nTPM: 107.0
Sample A Female 118.3
Sample B Female 117.4
Sample C Male 107.0
Sample D Male 117.3
Ventral hippocampus
nTPM: 83.2
Samples: 4

Max nTPM: 113.1
Min nTPM: 59.5
Sample A Female 79.2
Sample B Female 59.5
Sample C Male 81.0
Sample D Male 113.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 202.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 194.2
Samples: 4

Max nTPM: 200.2
Min nTPM: 180.1
Sample A Male 197.6
Sample B Male 200.2
Sample C Female 180.1
Sample D Female 199.0
Hippocampal formation
nTPM: 202.5
Samples: 4

Max nTPM: 219.2
Min nTPM: 180.4
Sample A Male 194.1
Sample B Male 216.1
Sample C Female 219.2
Sample D Female 180.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.2
71924386 Antisense, RP_050623_02_H11, Mouse strain C57BL/6J (56 days, male) 22.2
70528599 Antisense, RP_050623_02_H11, Mouse strain C57BL/6J (56 days, male) 17.5

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