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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
89.0
nTPM
Monaco:
40.0
nTPM
Schmiedel:
21.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
89.0
HPA sample
nTPM
gdT-cell nTPM: 60.3
Samples: 6
Max nTPM: 88.5
Min nTPM: 42.5
P10809_1007
42.5
P10809_1022
67.1
P10809_1041
88.5
P10809_1060
54.8
P10809_1077
48.9
P10809_1098
60.2
MAIT T-cell nTPM: 76.7
Samples: 6
Max nTPM: 88.4
Min nTPM: 47.9
P10809_1006
47.9
P10809_1024
84.9
P10809_1043
86.5
P10809_1062
72.8
P10809_1083
79.9
P10809_1097
88.4
Memory CD4 T-cell nTPM: 84.3
Samples: 6
Max nTPM: 92.3
Min nTPM: 71.4
P10809_1014
71.4
P10809_1026
86.0
P10809_1045
85.5
P10809_1064
92.0
P10809_1086
78.3
P10809_1113
92.3
Memory CD8 T-cell nTPM: 71.9
Samples: 5
Max nTPM: 87.2
Min nTPM: 55.7
P10809_1012
55.7
P10809_1027
87.2
P10809_1046
70.8
P10809_1065
60.9
P10809_1111
84.9
Naive CD4 T-cell nTPM: 89.0
Samples: 6
Max nTPM: 99.8
Min nTPM: 57.9
P10809_1015
57.9
P10809_1030
98.4
P10809_1049
94.9
P10809_1068
89.6
P10809_1085
93.2
P10809_1112
99.8
Naive CD8 T-cell nTPM: 79.3
Samples: 6
Max nTPM: 98.4
Min nTPM: 70.8
P10809_1016
75.9
P10809_1031
98.4
P10809_1050
71.4
P10809_1069
85.4
P10809_1087
70.8
P10809_1110
73.7
T-reg nTPM: 83.8
Samples: 6
Max nTPM: 108.1
Min nTPM: 65.9
P10809_1018
65.9
P10809_1037
88.4
P10809_1056
108.1
P10809_1075
81.1
P10809_1094
77.9
P10809_1106
81.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 25.7
Samples: 4
Max nTPM: 31.6
Min nTPM: 17.4
RHH5202_R3573
29.1
RHH5230_R3602
17.4
RHH5259_R3631
24.6
RHH5288_R3660
31.6
Effector memory CD8 T-cell nTPM: 26.1
Samples: 4
Max nTPM: 28.5
Min nTPM: 23.6
RHH5203_R3574
28.5
RHH5231_R3603
23.6
RHH5260_R3632
25.3
RHH5289_R3661
26.8
MAIT T-cell nTPM: 32.7
Samples: 4
Max nTPM: 56.2
Min nTPM: 20.5
RHH5233_R3605
20.5
RHH5205_R3576
23.0
RHH5262_R3634
30.9
RHH5297_R3663
56.2
Memory CD4 T-cell TFH nTPM: 40.0
Samples: 4
Max nTPM: 51.1
Min nTPM: 30.8
RHH5300_R3666
35.9
RHH5236_R3608
51.1
RHH5265_R3637
30.8
RHH5208_R3579
42.2
Memory CD4 T-cell Th1 nTPM: 29.3
Samples: 4
Max nTPM: 38.8
Min nTPM: 19.7
RHH5210_R3581
19.7
RHH5302_R3668
38.8
RHH5238_R3610
31.4
RHH5267_R3639
27.1
Memory CD4 T-cell Th1/Th17 nTPM: 37.9
Samples: 4
Max nTPM: 62.9
Min nTPM: 17.2
RHH5303_R3669
62.9
RHH5211_R3582
40.6
RHH5239_R3611
17.2
RHH5268_R3640
30.7
Memory CD4 T-cell Th17 nTPM: 26.6
Samples: 4
Max nTPM: 40.7
Min nTPM: 19.3
RHH5304_R3670
24.6
RHH5212_R3583
40.7
RHH5240_R3612
19.3
RHH5269_R3641
21.9
Memory CD4 T-cell Th2 nTPM: 38.5
Samples: 4
Max nTPM: 64.1
Min nTPM: 20.5
RHH5305_R3671
38.6
RHH5213_R3584
30.9
RHH5241_R3613
64.1
RHH5270_R3642
20.5
Naive CD4 T-cell nTPM: 27.7
Samples: 4
Max nTPM: 46.7
Min nTPM: 19.3
RHH5306_R3672
23.7
RHH5214_R3585
46.7
RHH5242_R3614
19.3
RHH5271_R3643
20.9
Naive CD8 T-cell nTPM: 27.2
Samples: 4
Max nTPM: 39.4
Min nTPM: 14.5
RHH5201_R3572
33.8
RHH5229_R3601
14.5
RHH5258_R3630
39.4
RHH5287_R3659
20.9
Non-Vd2 gdTCR nTPM: 29.0
Samples: 4
Max nTPM: 40.1
Min nTPM: 19.9
RHH5235_R3607
19.9
RHH5264_R3636
40.1
RHH5207_R3578
24.0
RHH5299_R3665
31.9
T-reg nTPM: 35.9
Samples: 4
Max nTPM: 46.2
Min nTPM: 25.5
RHH5301_R3667
46.2
RHH5237_R3609
40.8
RHH5266_R3638
31.0
RHH5209_R3580
25.5
Terminal effector memory CD4 T-cell nTPM: 27.0
Samples: 2
Max nTPM: 34.9
Min nTPM: 19.1
RHH5243_R3615
19.1
RHH5272_R3644
34.9
Terminal effector memory CD8 T-cell nTPM: 23.7
Samples: 4
Max nTPM: 35.8
Min nTPM: 14.9
RHH5232_R3604
14.9
RHH5204_R3575
35.8
RHH5261_R3633
17.2
RHH5296_R3662
26.8
Vd2 gdTCR nTPM: 37.2
Samples: 4
Max nTPM: 51.3
Min nTPM: 28.4
RHH5234_R3606
28.4
RHH5206_R3577
37.0
RHH5263_R3635
31.9
RHH5298_R3664
51.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
