We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
71.4
nTPM
Monaco:
54.4
nTPM
Schmiedel:
17.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
71.4
HPA sample
nTPM
gdT-cell nTPM: 56.0
Samples: 6
Max nTPM: 82.1
Min nTPM: 32.7
P10809_1007
32.7
P10809_1022
61.0
P10809_1041
82.1
P10809_1060
58.7
P10809_1077
48.5
P10809_1098
52.7
MAIT T-cell nTPM: 50.0
Samples: 6
Max nTPM: 73.0
Min nTPM: 29.0
P10809_1006
29.0
P10809_1024
49.2
P10809_1043
73.0
P10809_1062
57.4
P10809_1083
29.9
P10809_1097
61.3
Memory CD4 T-cell nTPM: 42.5
Samples: 6
Max nTPM: 47.6
Min nTPM: 31.6
P10809_1014
31.6
P10809_1026
40.6
P10809_1045
46.4
P10809_1064
46.9
P10809_1086
42.1
P10809_1113
47.6
Memory CD8 T-cell nTPM: 54.9
Samples: 5
Max nTPM: 77.5
Min nTPM: 31.3
P10809_1012
31.3
P10809_1027
47.7
P10809_1046
77.5
P10809_1065
59.4
P10809_1111
58.5
Naive CD4 T-cell nTPM: 41.7
Samples: 6
Max nTPM: 55.8
Min nTPM: 21.7
P10809_1015
21.7
P10809_1030
43.3
P10809_1049
51.3
P10809_1068
35.3
P10809_1085
55.8
P10809_1112
42.5
Naive CD8 T-cell nTPM: 46.8
Samples: 6
Max nTPM: 59.5
Min nTPM: 26.2
P10809_1016
26.2
P10809_1031
59.5
P10809_1050
51.5
P10809_1069
46.0
P10809_1087
53.7
P10809_1110
44.0
T-reg nTPM: 71.4
Samples: 6
Max nTPM: 93.8
Min nTPM: 47.6
P10809_1018
47.6
P10809_1037
56.9
P10809_1056
93.8
P10809_1075
70.6
P10809_1094
87.4
P10809_1106
72.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
54.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 25.5
Samples: 4
Max nTPM: 37.9
Min nTPM: 14.2
RHH5202_R3573
31.1
RHH5230_R3602
14.2
RHH5259_R3631
18.6
RHH5288_R3660
37.9
Effector memory CD8 T-cell nTPM: 46.1
Samples: 4
Max nTPM: 63.9
Min nTPM: 33.7
RHH5203_R3574
49.2
RHH5231_R3603
63.9
RHH5260_R3632
33.7
RHH5289_R3661
37.6
MAIT T-cell nTPM: 39.6
Samples: 4
Max nTPM: 48.8
Min nTPM: 19.9
RHH5233_R3605
46.0
RHH5205_R3576
19.9
RHH5262_R3634
43.7
RHH5297_R3663
48.8
Memory CD4 T-cell TFH nTPM: 40.0
Samples: 4
Max nTPM: 55.2
Min nTPM: 26.5
RHH5300_R3666
34.4
RHH5236_R3608
43.9
RHH5265_R3637
26.5
RHH5208_R3579
55.2
Memory CD4 T-cell Th1 nTPM: 30.3
Samples: 4
Max nTPM: 44.9
Min nTPM: 22.6
RHH5210_R3581
25.3
RHH5302_R3668
44.9
RHH5238_R3610
22.6
RHH5267_R3639
28.3
Memory CD4 T-cell Th1/Th17 nTPM: 34.2
Samples: 4
Max nTPM: 51.9
Min nTPM: 22.9
RHH5303_R3669
51.9
RHH5211_R3582
35.2
RHH5239_R3611
22.9
RHH5268_R3640
26.8
Memory CD4 T-cell Th17 nTPM: 24.3
Samples: 4
Max nTPM: 29.6
Min nTPM: 19.4
RHH5304_R3670
29.6
RHH5212_R3583
25.1
RHH5240_R3612
19.4
RHH5269_R3641
23.1
Memory CD4 T-cell Th2 nTPM: 28.4
Samples: 4
Max nTPM: 29.6
Min nTPM: 27.2
RHH5305_R3671
27.2
RHH5213_R3584
27.5
RHH5241_R3613
29.2
RHH5270_R3642
29.6
Naive CD4 T-cell nTPM: 24.0
Samples: 4
Max nTPM: 25.8
Min nTPM: 19.5
RHH5306_R3672
25.1
RHH5214_R3585
25.8
RHH5242_R3614
25.6
RHH5271_R3643
19.5
Naive CD8 T-cell nTPM: 20.6
Samples: 4
Max nTPM: 27.6
Min nTPM: 15.3
RHH5201_R3572
15.3
RHH5229_R3601
17.6
RHH5258_R3630
27.6
RHH5287_R3659
22.0
Non-Vd2 gdTCR nTPM: 53.2
Samples: 4
Max nTPM: 65.4
Min nTPM: 36.2
RHH5235_R3607
36.2
RHH5264_R3636
65.4
RHH5207_R3578
57.2
RHH5299_R3665
53.9
T-reg nTPM: 27.6
Samples: 4
Max nTPM: 43.7
Min nTPM: 18.5
RHH5301_R3667
43.7
RHH5237_R3609
19.6
RHH5266_R3638
18.5
RHH5209_R3580
28.6
Terminal effector memory CD4 T-cell nTPM: 39.4
Samples: 2
Max nTPM: 46.6
Min nTPM: 32.2
RHH5243_R3615
32.2
RHH5272_R3644
46.6
Terminal effector memory CD8 T-cell nTPM: 49.3
Samples: 4
Max nTPM: 61.7
Min nTPM: 42.5
RHH5232_R3604
42.7
RHH5204_R3575
61.7
RHH5261_R3633
50.4
RHH5296_R3662
42.5
Vd2 gdTCR nTPM: 54.4
Samples: 4
Max nTPM: 85.7
Min nTPM: 30.7
RHH5234_R3606
46.4
RHH5206_R3577
85.7
RHH5263_R3635
30.7
RHH5298_R3664
54.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
