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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
122.6
nTPM
Monaco:
449.7
nTPM
Schmiedel:
141.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
122.6
HPA sample
nTPM
gdT-cell nTPM: 122.6
Samples: 6
Max nTPM: 158.5
Min nTPM: 95.6
P10809_1007
111.9
P10809_1022
117.5
P10809_1041
109.1
P10809_1060
158.5
P10809_1077
143.0
P10809_1098
95.6
MAIT T-cell nTPM: 68.5
Samples: 6
Max nTPM: 86.1
Min nTPM: 50.9
P10809_1006
50.9
P10809_1024
63.0
P10809_1043
71.5
P10809_1062
86.1
P10809_1083
81.6
P10809_1097
57.6
Memory CD4 T-cell nTPM: 82.1
Samples: 6
Max nTPM: 130.7
Min nTPM: 48.6
P10809_1014
48.6
P10809_1026
68.6
P10809_1045
81.7
P10809_1064
130.7
P10809_1086
101.6
P10809_1113
61.2
Memory CD8 T-cell nTPM: 93.5
Samples: 5
Max nTPM: 126.5
Min nTPM: 60.4
P10809_1012
60.4
P10809_1027
95.9
P10809_1046
103.5
P10809_1065
126.5
P10809_1111
81.1
Naive CD4 T-cell nTPM: 68.7
Samples: 6
Max nTPM: 89.2
Min nTPM: 36.8
P10809_1015
36.8
P10809_1030
74.5
P10809_1049
79.1
P10809_1068
89.2
P10809_1085
80.2
P10809_1112
52.2
Naive CD8 T-cell nTPM: 75.8
Samples: 6
Max nTPM: 103.2
Min nTPM: 44.1
P10809_1016
44.1
P10809_1031
84.3
P10809_1050
83.5
P10809_1069
93.7
P10809_1087
103.2
P10809_1110
45.9
T-reg nTPM: 73.5
Samples: 6
Max nTPM: 92.0
Min nTPM: 53.3
P10809_1018
53.3
P10809_1037
58.4
P10809_1056
84.6
P10809_1075
92.0
P10809_1094
79.6
P10809_1106
72.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
449.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 354.2
Samples: 4
Max nTPM: 402.4
Min nTPM: 240.1
RHH5202_R3573
392.8
RHH5230_R3602
240.1
RHH5259_R3631
381.5
RHH5288_R3660
402.4
Effector memory CD8 T-cell nTPM: 376.4
Samples: 4
Max nTPM: 475.4
Min nTPM: 325.4
RHH5203_R3574
339.6
RHH5231_R3603
325.4
RHH5260_R3632
365.2
RHH5289_R3661
475.4
MAIT T-cell nTPM: 278.1
Samples: 4
Max nTPM: 384.1
Min nTPM: 187.3
RHH5233_R3605
384.1
RHH5205_R3576
298.2
RHH5262_R3634
187.3
RHH5297_R3663
242.7
Memory CD4 T-cell TFH nTPM: 390.7
Samples: 4
Max nTPM: 492.7
Min nTPM: 327.9
RHH5300_R3666
327.9
RHH5236_R3608
375.1
RHH5265_R3637
367.0
RHH5208_R3579
492.7
Memory CD4 T-cell Th1 nTPM: 307.2
Samples: 4
Max nTPM: 364.5
Min nTPM: 263.3
RHH5210_R3581
305.7
RHH5302_R3668
295.1
RHH5238_R3610
364.5
RHH5267_R3639
263.3
Memory CD4 T-cell Th1/Th17 nTPM: 288.4
Samples: 4
Max nTPM: 377.6
Min nTPM: 234.7
RHH5303_R3669
281.6
RHH5211_R3582
234.7
RHH5239_R3611
377.6
RHH5268_R3640
259.6
Memory CD4 T-cell Th17 nTPM: 336.1
Samples: 4
Max nTPM: 419.2
Min nTPM: 302.2
RHH5304_R3670
306.1
RHH5212_R3583
316.7
RHH5240_R3612
419.2
RHH5269_R3641
302.2
Memory CD4 T-cell Th2 nTPM: 342.2
Samples: 4
Max nTPM: 369.7
Min nTPM: 313.1
RHH5305_R3671
313.1
RHH5213_R3584
369.7
RHH5241_R3613
354.4
RHH5270_R3642
331.4
Naive CD4 T-cell nTPM: 194.6
Samples: 4
Max nTPM: 248.8
Min nTPM: 164.3
RHH5306_R3672
186.5
RHH5214_R3585
178.6
RHH5242_R3614
248.8
RHH5271_R3643
164.3
Naive CD8 T-cell nTPM: 247.8
Samples: 4
Max nTPM: 261.3
Min nTPM: 236.8
RHH5201_R3572
236.8
RHH5229_R3601
261.3
RHH5258_R3630
255.4
RHH5287_R3659
237.5
Non-Vd2 gdTCR nTPM: 449.7
Samples: 4
Max nTPM: 516.2
Min nTPM: 402.0
RHH5235_R3607
431.7
RHH5264_R3636
516.2
RHH5207_R3578
402.0
RHH5299_R3665
448.8
T-reg nTPM: 262.2
Samples: 4
Max nTPM: 315.0
Min nTPM: 216.9
RHH5301_R3667
269.2
RHH5237_R3609
247.7
RHH5266_R3638
216.9
RHH5209_R3580
315.0
Terminal effector memory CD4 T-cell nTPM: 397.9
Samples: 2
Max nTPM: 401.5
Min nTPM: 394.2
RHH5243_R3615
394.2
RHH5272_R3644
401.5
Terminal effector memory CD8 T-cell nTPM: 398.8
Samples: 4
Max nTPM: 473.3
Min nTPM: 349.9
RHH5232_R3604
473.3
RHH5204_R3575
349.9
RHH5261_R3633
395.9
RHH5296_R3662
376.2
Vd2 gdTCR nTPM: 324.0
Samples: 4
Max nTPM: 367.6
Min nTPM: 279.2
RHH5234_R3606
322.1
RHH5206_R3577
327.1
RHH5263_R3635
367.6
RHH5298_R3664
279.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
