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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
60.3
nTPM
Monaco:
196.0
nTPM
Schmiedel:
63.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
60.3
HPA sample
nTPM
gdT-cell nTPM: 42.5
Samples: 6
Max nTPM: 53.8
Min nTPM: 38.1
P10809_1007
38.1
P10809_1022
39.2
P10809_1041
53.8
P10809_1060
41.6
P10809_1077
44.1
P10809_1098
38.3
MAIT T-cell nTPM: 40.4
Samples: 6
Max nTPM: 52.2
Min nTPM: 31.7
P10809_1006
33.7
P10809_1024
50.1
P10809_1043
36.3
P10809_1062
52.2
P10809_1083
38.1
P10809_1097
31.7
Memory CD4 T-cell nTPM: 47.1
Samples: 6
Max nTPM: 49.3
Min nTPM: 45.6
P10809_1014
47.2
P10809_1026
46.1
P10809_1045
49.3
P10809_1064
46.6
P10809_1086
47.5
P10809_1113
45.6
Memory CD8 T-cell nTPM: 43.5
Samples: 5
Max nTPM: 49.7
Min nTPM: 39.1
P10809_1012
39.1
P10809_1027
49.7
P10809_1046
39.2
P10809_1065
43.6
P10809_1111
45.7
Naive CD4 T-cell nTPM: 55.1
Samples: 6
Max nTPM: 65.7
Min nTPM: 50.8
P10809_1015
54.3
P10809_1030
65.7
P10809_1049
53.2
P10809_1068
53.8
P10809_1085
50.8
P10809_1112
52.9
Naive CD8 T-cell nTPM: 49.7
Samples: 6
Max nTPM: 60.4
Min nTPM: 38.6
P10809_1016
60.4
P10809_1031
38.6
P10809_1050
46.5
P10809_1069
52.4
P10809_1087
47.7
P10809_1110
52.8
T-reg nTPM: 60.3
Samples: 6
Max nTPM: 79.0
Min nTPM: 36.9
P10809_1018
51.7
P10809_1037
79.0
P10809_1056
67.5
P10809_1075
36.9
P10809_1094
66.1
P10809_1106
60.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
196.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 156.8
Samples: 4
Max nTPM: 204.4
Min nTPM: 104.7
RHH5202_R3573
204.4
RHH5230_R3602
165.4
RHH5259_R3631
104.7
RHH5288_R3660
152.7
Effector memory CD8 T-cell nTPM: 124.6
Samples: 4
Max nTPM: 144.1
Min nTPM: 108.4
RHH5203_R3574
130.7
RHH5231_R3603
115.2
RHH5260_R3632
108.4
RHH5289_R3661
144.1
MAIT T-cell nTPM: 137.0
Samples: 4
Max nTPM: 147.0
Min nTPM: 123.7
RHH5233_R3605
134.1
RHH5205_R3576
143.1
RHH5262_R3634
147.0
RHH5297_R3663
123.7
Memory CD4 T-cell TFH nTPM: 156.6
Samples: 4
Max nTPM: 177.5
Min nTPM: 141.4
RHH5300_R3666
141.6
RHH5236_R3608
166.0
RHH5265_R3637
141.4
RHH5208_R3579
177.5
Memory CD4 T-cell Th1 nTPM: 143.3
Samples: 4
Max nTPM: 152.6
Min nTPM: 138.3
RHH5210_R3581
152.6
RHH5302_R3668
143.2
RHH5238_R3610
139.1
RHH5267_R3639
138.3
Memory CD4 T-cell Th1/Th17 nTPM: 136.8
Samples: 4
Max nTPM: 167.0
Min nTPM: 118.5
RHH5303_R3669
167.0
RHH5211_R3582
121.3
RHH5239_R3611
118.5
RHH5268_R3640
140.4
Memory CD4 T-cell Th17 nTPM: 129.9
Samples: 4
Max nTPM: 189.6
Min nTPM: 92.7
RHH5304_R3670
189.6
RHH5212_R3583
92.7
RHH5240_R3612
128.5
RHH5269_R3641
108.6
Memory CD4 T-cell Th2 nTPM: 153.6
Samples: 4
Max nTPM: 181.4
Min nTPM: 128.5
RHH5305_R3671
169.7
RHH5213_R3584
134.8
RHH5241_R3613
181.4
RHH5270_R3642
128.5
Naive CD4 T-cell nTPM: 196.1
Samples: 4
Max nTPM: 228.8
Min nTPM: 167.2
RHH5306_R3672
167.2
RHH5214_R3585
200.2
RHH5242_R3614
188.0
RHH5271_R3643
228.8
Naive CD8 T-cell nTPM: 195.5
Samples: 4
Max nTPM: 237.9
Min nTPM: 135.6
RHH5201_R3572
237.9
RHH5229_R3601
135.6
RHH5258_R3630
201.0
RHH5287_R3659
207.6
Non-Vd2 gdTCR nTPM: 119.2
Samples: 4
Max nTPM: 148.0
Min nTPM: 100.2
RHH5235_R3607
107.0
RHH5264_R3636
121.5
RHH5207_R3578
148.0
RHH5299_R3665
100.2
T-reg nTPM: 159.8
Samples: 4
Max nTPM: 204.1
Min nTPM: 127.4
RHH5301_R3667
127.4
RHH5237_R3609
143.1
RHH5266_R3638
164.7
RHH5209_R3580
204.1
Terminal effector memory CD4 T-cell nTPM: 132.3
Samples: 2
Max nTPM: 139.4
Min nTPM: 125.1
RHH5243_R3615
125.1
RHH5272_R3644
139.4
Terminal effector memory CD8 T-cell nTPM: 132.3
Samples: 4
Max nTPM: 171.2
Min nTPM: 112.4
RHH5232_R3604
171.2
RHH5204_R3575
112.4
RHH5261_R3633
120.7
RHH5296_R3662
124.7
Vd2 gdTCR nTPM: 138.2
Samples: 4
Max nTPM: 161.4
Min nTPM: 112.7
RHH5234_R3606
141.9
RHH5206_R3577
136.8
RHH5263_R3635
161.4
RHH5298_R3664
112.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
