HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:17.9 nTPM
HPA Brain:24.9 nTPM
GTEx:17.9 nTPM
FANTOM5:38.5 Scaled Tags Per Million
Pig:29.1 nTPM
Mouse:26.1 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019198
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.9
Sample id Sample description nTPM
Hippocampus
nTPM: 23.6
1855 Male, age 76, left hemisphere 25.2
2148 Female, age 91, left hemisphere 24.6
1911 Female, age 85, right hemisphere 23.9
1898 Male, age 80, left hemisphere 23.3
2621 Female, age 67, right hemisphere 22.8
2529 Female, age 94, left hemisphere 21.9
Dentate gyrus
nTPM: 24.5
2531 Female, age 67, both hemispheres 27.1
2010 Male, age 76, both hemispheres 25.7
2246 Female, age 85, both hemispheres 25.0
2528 Male, age 74, both hemispheres 24.8
1927 Female, age 91, both hemispheres 22.6
2530 Female, age 94, left hemisphere 22.1
Entorhinal gyrus
nTPM: 24.0
2613 Female, age 94, left hemisphere 24.5
2686 Male, age 75, right hemisphere 24.3
1938 Female, age 85, left hemisphere 24.0
1787 Male, age 76, left hemisphere 23.9
2117 Female, age 91, right hemisphere 23.9
2764 Male, age 80, right hemisphere 23.3
Hippocampus, CA1
nTPM: 24.3
2082 Female, age 91, right hemisphere 26.5
1873 Female, age 85, both hemispheres 24.8
2045 Male, age 76, both hemispheres 24.5
2527 Male, age 74, both hemispheres 23.8
2749 Male, age 80, left hemisphere 21.7
Hippocampus, CA2
nTPM: 23.0
2113 Female, age 91, right hemisphere 26.2
2249 Male, age 74, both hemispheres 25.0
1940 Female, age 85, left hemisphere 22.8
1963 Male, age 80, left hemisphere 21.9
1892 Male, age 76, both hemispheres 21.4
2437 Female, age 94, left hemisphere 20.5
Hippocampus, CA3
nTPM: 24.9
2620 Female, age 94, left hemisphere 29.1
2861 Female, age 67, both hemispheres 25.8
2137 Male, age 80, left hemisphere 24.7
1891 Female, age 85, both hemispheres 24.1
2436 Male, age 74, both hemispheres 23.6
1867 Male, age 76, both hemispheres 22.3
Parahippocampal cortex
nTPM: 22.9
2693 Female, age 94, both hemispheres 25.2
2532 Female, age 72, left hemisphere 24.4
2622 Female, age 67, right hemisphere 23.3
1933 Female, age 85, both hemispheres 23.0
1990 Female, age 91, right hemisphere 22.7
1850 Male, age 80, both hemispheres 22.6
2018 Male, age 76, both hemispheres 22.4
2692 Male, age 74, both hemispheres 22.2
2245 Female, age 91, both hemispheres 21.9
2250 Female, age 67, right hemisphere 21.4
Perirhinal gyrus
nTPM: 22.5
2521 Female, age 94, right hemisphere 23.6
1841 Female, age 85, right hemisphere 23.4
2848 Male, age 76, right hemisphere 22.5
1847 Female, age 91, left hemisphere 22.0
1794 Male, age 80, right hemisphere 21.2
Subiculum
nTPM: 23.4
2042 Male, age 76, both hemispheres 25.0
2729 Female, age 91, right hemisphere 24.6
1977 Female, age 85, both hemispheres 24.5
1901 Male, age 80, both hemispheres 22.6
2619 Male, age 74, both hemispheres 22.6
2438 Female, age 94, left hemisphere 20.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.9
Samples: 197

Max nTPM: 38.0
Min nTPM: 9.1
Std nTPM: 3.4
Median nTPM: 17.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 38.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 29.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 28.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 26.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 26.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 25.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 24.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 23.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 23.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 23.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 22.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.5
FF:10153-102I9 76 years, female 39.7
FF:10169-103B7 60 years, female 37.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.1
Pig sample Sample description nTPM
Subiculum
nTPM: 24.2
Samples: 4

Max nTPM: 25.7
Min nTPM: 22.9
Sample A Female 25.7
Sample B Female 22.9
Sample C Male 25.1
Sample D Male 22.9
Dorsal hippocampus
nTPM: 25.6
Samples: 4

Max nTPM: 30.9
Min nTPM: 17.9
Sample A Female 30.9
Sample B Female 25.5
Sample C Male 28.2
Sample D Male 17.9
Entorhinal cortex
nTPM: 19.8
Samples: 4

Max nTPM: 22.1
Min nTPM: 17.4
Sample A Female 19.9
Sample B Female 19.6
Sample C Male 22.1
Sample D Male 17.4
Ventral hippocampus
nTPM: 29.1
Samples: 4

Max nTPM: 39.1
Min nTPM: 21.6
Sample A Female 30.0
Sample B Female 21.6
Sample C Male 39.1
Sample D Male 25.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.1
Samples: 4

Max nTPM: 27.4
Min nTPM: 24.6
Sample A Male 24.6
Sample B Male 25.4
Sample C Female 27.4
Sample D Female 26.8
Hippocampal formation
nTPM: 25.6
Samples: 4

Max nTPM: 26.5
Min nTPM: 24.5
Sample A Male 25.6
Sample B Male 24.5
Sample C Female 26.5
Sample D Female 25.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
70539180 Antisense, RP_050324_02_D05, Mouse strain C57BL/6J (56 days, male) 0.6

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