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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.8
nTPM
Monaco:
140.1
nTPM
Schmiedel:
155.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.8
HPA sample
nTPM
gdT-cell nTPM: 68.9
Samples: 6
Max nTPM: 88.4
Min nTPM: 35.9
P10809_1007
35.9
P10809_1022
81.2
P10809_1041
88.4
P10809_1060
68.3
P10809_1077
66.4
P10809_1098
73.0
MAIT T-cell nTPM: 64.1
Samples: 6
Max nTPM: 87.2
Min nTPM: 45.0
P10809_1006
45.0
P10809_1024
87.2
P10809_1043
72.2
P10809_1062
64.6
P10809_1083
46.5
P10809_1097
68.8
Memory CD4 T-cell nTPM: 67.0
Samples: 6
Max nTPM: 75.1
Min nTPM: 47.9
P10809_1014
47.9
P10809_1026
75.1
P10809_1045
69.7
P10809_1064
66.5
P10809_1086
70.0
P10809_1113
72.7
Memory CD8 T-cell nTPM: 62.6
Samples: 5
Max nTPM: 76.2
Min nTPM: 46.7
P10809_1012
46.7
P10809_1027
59.6
P10809_1046
76.2
P10809_1065
62.3
P10809_1111
68.3
Naive CD4 T-cell nTPM: 44.6
Samples: 6
Max nTPM: 51.3
Min nTPM: 31.3
P10809_1015
31.3
P10809_1030
51.3
P10809_1049
47.5
P10809_1068
39.1
P10809_1085
51.1
P10809_1112
47.2
Naive CD8 T-cell nTPM: 49.1
Samples: 6
Max nTPM: 70.6
Min nTPM: 27.7
P10809_1016
27.7
P10809_1031
48.7
P10809_1050
39.4
P10809_1069
70.6
P10809_1087
58.5
P10809_1110
49.8
T-reg nTPM: 65.8
Samples: 6
Max nTPM: 85.7
Min nTPM: 39.7
P10809_1018
46.2
P10809_1037
71.7
P10809_1056
77.1
P10809_1075
39.7
P10809_1094
85.7
P10809_1106
74.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
140.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 98.8
Samples: 4
Max nTPM: 110.2
Min nTPM: 81.6
RHH5202_R3573
102.2
RHH5230_R3602
101.3
RHH5259_R3631
110.2
RHH5288_R3660
81.6
Effector memory CD8 T-cell nTPM: 134.0
Samples: 4
Max nTPM: 166.3
Min nTPM: 112.5
RHH5203_R3574
112.5
RHH5231_R3603
123.0
RHH5260_R3632
166.3
RHH5289_R3661
134.3
MAIT T-cell nTPM: 101.5
Samples: 4
Max nTPM: 105.7
Min nTPM: 90.2
RHH5233_R3605
105.4
RHH5205_R3576
105.7
RHH5262_R3634
104.7
RHH5297_R3663
90.2
Memory CD4 T-cell TFH nTPM: 112.9
Samples: 4
Max nTPM: 136.1
Min nTPM: 86.3
RHH5300_R3666
86.3
RHH5236_R3608
136.1
RHH5265_R3637
99.8
RHH5208_R3579
129.3
Memory CD4 T-cell Th1 nTPM: 97.0
Samples: 4
Max nTPM: 124.2
Min nTPM: 69.7
RHH5210_R3581
69.7
RHH5302_R3668
81.4
RHH5238_R3610
124.2
RHH5267_R3639
112.8
Memory CD4 T-cell Th1/Th17 nTPM: 138.1
Samples: 4
Max nTPM: 185.2
Min nTPM: 116.7
RHH5303_R3669
116.7
RHH5211_R3582
131.0
RHH5239_R3611
185.2
RHH5268_R3640
119.6
Memory CD4 T-cell Th17 nTPM: 137.3
Samples: 4
Max nTPM: 198.6
Min nTPM: 101.5
RHH5304_R3670
116.8
RHH5212_R3583
101.5
RHH5240_R3612
198.6
RHH5269_R3641
132.4
Memory CD4 T-cell Th2 nTPM: 122.5
Samples: 4
Max nTPM: 139.7
Min nTPM: 101.3
RHH5305_R3671
101.3
RHH5213_R3584
139.7
RHH5241_R3613
122.0
RHH5270_R3642
127.0
Naive CD4 T-cell nTPM: 74.2
Samples: 4
Max nTPM: 85.7
Min nTPM: 61.1
RHH5306_R3672
69.4
RHH5214_R3585
85.7
RHH5242_R3614
61.1
RHH5271_R3643
80.5
Naive CD8 T-cell nTPM: 66.4
Samples: 4
Max nTPM: 80.2
Min nTPM: 46.2
RHH5201_R3572
80.2
RHH5229_R3601
70.1
RHH5258_R3630
46.2
RHH5287_R3659
69.2
Non-Vd2 gdTCR nTPM: 133.1
Samples: 4
Max nTPM: 164.5
Min nTPM: 102.0
RHH5235_R3607
164.5
RHH5264_R3636
116.9
RHH5207_R3578
148.8
RHH5299_R3665
102.0
T-reg nTPM: 104.5
Samples: 4
Max nTPM: 143.2
Min nTPM: 69.0
RHH5301_R3667
69.0
RHH5237_R3609
143.2
RHH5266_R3638
107.7
RHH5209_R3580
97.9
Terminal effector memory CD4 T-cell nTPM: 135.2
Samples: 2
Max nTPM: 147.2
Min nTPM: 123.1
RHH5243_R3615
147.2
RHH5272_R3644
123.1
Terminal effector memory CD8 T-cell nTPM: 140.1
Samples: 4
Max nTPM: 193.8
Min nTPM: 99.7
RHH5232_R3604
146.2
RHH5204_R3575
99.7
RHH5261_R3633
193.8
RHH5296_R3662
120.7
Vd2 gdTCR nTPM: 123.7
Samples: 4
Max nTPM: 145.7
Min nTPM: 76.4
RHH5234_R3606
135.3
RHH5206_R3577
137.5
RHH5263_R3635
145.7
RHH5298_R3664
76.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
