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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
14.4
nTPM
Monaco:
20.3
nTPM
Schmiedel:
47.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
14.4
HPA sample
nTPM
gdT-cell nTPM: 12.7
Samples: 6
Max nTPM: 19.4
Min nTPM: 6.3
P10809_1007
12.4
P10809_1022
15.1
P10809_1041
13.3
P10809_1060
6.3
P10809_1077
19.4
P10809_1098
9.4
MAIT T-cell nTPM: 12.8
Samples: 6
Max nTPM: 20.8
Min nTPM: 7.8
P10809_1006
8.4
P10809_1024
13.0
P10809_1043
8.2
P10809_1062
7.8
P10809_1083
20.8
P10809_1097
18.8
Memory CD4 T-cell nTPM: 13.0
Samples: 6
Max nTPM: 20.5
Min nTPM: 8.7
P10809_1014
11.6
P10809_1026
20.5
P10809_1045
8.7
P10809_1064
10.9
P10809_1086
15.5
P10809_1113
10.9
Memory CD8 T-cell nTPM: 12.9
Samples: 5
Max nTPM: 20.2
Min nTPM: 8.7
P10809_1012
13.2
P10809_1027
20.2
P10809_1046
8.7
P10809_1065
9.1
P10809_1111
13.4
Naive CD4 T-cell nTPM: 13.4
Samples: 6
Max nTPM: 23.3
Min nTPM: 7.0
P10809_1015
8.1
P10809_1030
23.3
P10809_1049
12.4
P10809_1068
7.0
P10809_1085
15.2
P10809_1112
14.1
Naive CD8 T-cell nTPM: 13.7
Samples: 6
Max nTPM: 29.0
Min nTPM: 7.5
P10809_1016
11.8
P10809_1031
29.0
P10809_1050
9.9
P10809_1069
7.5
P10809_1087
15.0
P10809_1110
8.7
T-reg nTPM: 14.4
Samples: 6
Max nTPM: 24.3
Min nTPM: 9.9
P10809_1018
10.4
P10809_1037
16.0
P10809_1056
12.2
P10809_1075
9.9
P10809_1094
24.3
P10809_1106
13.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
20.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 14.5
Samples: 4
Max nTPM: 21.4
Min nTPM: 5.6
RHH5202_R3573
5.6
RHH5230_R3602
21.4
RHH5259_R3631
19.5
RHH5288_R3660
11.5
Effector memory CD8 T-cell nTPM: 15.3
Samples: 4
Max nTPM: 18.8
Min nTPM: 11.9
RHH5203_R3574
11.9
RHH5231_R3603
17.6
RHH5260_R3632
18.8
RHH5289_R3661
12.9
MAIT T-cell nTPM: 11.9
Samples: 4
Max nTPM: 18.4
Min nTPM: 6.3
RHH5233_R3605
9.6
RHH5205_R3576
18.4
RHH5262_R3634
6.3
RHH5297_R3663
13.1
Memory CD4 T-cell TFH nTPM: 13.2
Samples: 4
Max nTPM: 15.6
Min nTPM: 9.9
RHH5300_R3666
14.0
RHH5236_R3608
13.4
RHH5265_R3637
15.6
RHH5208_R3579
9.9
Memory CD4 T-cell Th1 nTPM: 9.9
Samples: 4
Max nTPM: 15.1
Min nTPM: 3.3
RHH5210_R3581
9.4
RHH5302_R3668
15.1
RHH5238_R3610
3.3
RHH5267_R3639
11.7
Memory CD4 T-cell Th1/Th17 nTPM: 15.9
Samples: 4
Max nTPM: 18.0
Min nTPM: 12.9
RHH5303_R3669
18.0
RHH5211_R3582
16.0
RHH5239_R3611
16.7
RHH5268_R3640
12.9
Memory CD4 T-cell Th17 nTPM: 14.5
Samples: 4
Max nTPM: 21.5
Min nTPM: 8.7
RHH5304_R3670
21.5
RHH5212_R3583
8.7
RHH5240_R3612
15.2
RHH5269_R3641
12.6
Memory CD4 T-cell Th2 nTPM: 16.8
Samples: 4
Max nTPM: 26.7
Min nTPM: 10.3
RHH5305_R3671
18.6
RHH5213_R3584
10.3
RHH5241_R3613
26.7
RHH5270_R3642
11.7
Naive CD4 T-cell nTPM: 7.4
Samples: 4
Max nTPM: 11.8
Min nTPM: 2.6
RHH5306_R3672
8.0
RHH5214_R3585
7.2
RHH5242_R3614
2.6
RHH5271_R3643
11.8
Naive CD8 T-cell nTPM: 11.6
Samples: 4
Max nTPM: 16.7
Min nTPM: 6.1
RHH5201_R3572
8.0
RHH5229_R3601
6.1
RHH5258_R3630
16.7
RHH5287_R3659
15.6
Non-Vd2 gdTCR nTPM: 9.2
Samples: 4
Max nTPM: 12.9
Min nTPM: 3.1
RHH5235_R3607
10.4
RHH5264_R3636
3.1
RHH5207_R3578
12.9
RHH5299_R3665
10.5
T-reg nTPM: 12.6
Samples: 4
Max nTPM: 20.4
Min nTPM: 6.8
RHH5301_R3667
6.8
RHH5237_R3609
20.4
RHH5266_R3638
14.9
RHH5209_R3580
8.2
Terminal effector memory CD4 T-cell nTPM: 13.6
Samples: 2
Max nTPM: 21.2
Min nTPM: 6.0
RHH5243_R3615
21.2
RHH5272_R3644
6.0
Terminal effector memory CD8 T-cell nTPM: 11.0
Samples: 4
Max nTPM: 16.2
Min nTPM: 5.9
RHH5232_R3604
16.2
RHH5204_R3575
10.8
RHH5261_R3633
5.9
RHH5296_R3662
11.2
Vd2 gdTCR nTPM: 20.3
Samples: 4
Max nTPM: 27.6
Min nTPM: 15.9
RHH5234_R3606
15.9
RHH5206_R3577
20.9
RHH5263_R3635
16.9
RHH5298_R3664
27.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
