HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:9.2 nTPM
HPA Brain:128.4 nTPM
GTEx:9.2 nTPM
FANTOM5:53.7 Scaled Tags Per Million
Pig:44.3 nTPM
Mouse:40.0 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023274
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 128.4
Sample id Sample description nTPM
Hippocampus
nTPM: 97.5
2621 Female, age 67, right hemisphere 118.4
2148 Female, age 91, left hemisphere 108.4
1855 Male, age 76, left hemisphere 97.7
1911 Female, age 85, right hemisphere 97.1
1898 Male, age 80, left hemisphere 87.0
2529 Female, age 94, left hemisphere 76.1
Dentate gyrus
nTPM: 103.6
2531 Female, age 67, both hemispheres 138.1
1927 Female, age 91, both hemispheres 125.1
2246 Female, age 85, both hemispheres 108.1
2010 Male, age 76, both hemispheres 87.4
2528 Male, age 74, both hemispheres 83.6
2530 Female, age 94, left hemisphere 79.3
Entorhinal gyrus
nTPM: 116.5
2613 Female, age 94, left hemisphere 171.6
1938 Female, age 85, left hemisphere 125.5
1787 Male, age 76, left hemisphere 120.7
2686 Male, age 75, right hemisphere 104.2
2764 Male, age 80, right hemisphere 102.9
2117 Female, age 91, right hemisphere 73.9
Hippocampus, CA1
nTPM: 108.8
2749 Male, age 80, left hemisphere 140.1
2045 Male, age 76, both hemispheres 121.6
1873 Female, age 85, both hemispheres 108.9
2527 Male, age 74, both hemispheres 87.1
2082 Female, age 91, right hemisphere 86.5
Hippocampus, CA2
nTPM: 91.4
1892 Male, age 76, both hemispheres 106.8
2437 Female, age 94, left hemisphere 96.2
2113 Female, age 91, right hemisphere 92.2
1940 Female, age 85, left hemisphere 91.2
1963 Male, age 80, left hemisphere 90.0
2249 Male, age 74, both hemispheres 72.2
Hippocampus, CA3
nTPM: 114.2
2620 Female, age 94, left hemisphere 173.1
2137 Male, age 80, left hemisphere 126.6
1867 Male, age 76, both hemispheres 101.9
2861 Female, age 67, both hemispheres 99.3
1891 Female, age 85, both hemispheres 94.9
2436 Male, age 74, both hemispheres 89.7
Parahippocampal cortex
nTPM: 109.2
2693 Female, age 94, both hemispheres 134.1
1850 Male, age 80, both hemispheres 126.6
2622 Female, age 67, right hemisphere 121.8
1933 Female, age 85, both hemispheres 111.4
2245 Female, age 91, both hemispheres 105.2
2532 Female, age 72, left hemisphere 105.0
2250 Female, age 67, right hemisphere 103.9
2692 Male, age 74, both hemispheres 99.0
2018 Male, age 76, both hemispheres 93.1
1990 Female, age 91, right hemisphere 92.2
Perirhinal gyrus
nTPM: 128.4
1847 Female, age 91, left hemisphere 144.0
1841 Female, age 85, right hemisphere 135.8
2521 Female, age 94, right hemisphere 135.7
1794 Male, age 80, right hemisphere 120.7
2848 Male, age 76, right hemisphere 105.9
Subiculum
nTPM: 94.3
1977 Female, age 85, both hemispheres 110.7
1901 Male, age 80, both hemispheres 98.7
2042 Male, age 76, both hemispheres 95.8
2438 Female, age 94, left hemisphere 92.0
2729 Female, age 91, right hemisphere 87.5
2619 Male, age 74, both hemispheres 81.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.2
Samples: 197

Max nTPM: 17.5
Min nTPM: 3.5
Std nTPM: 2.6
Median nTPM: 9.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 17.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 16.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 16.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 15.1
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 15.0
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 14.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 14.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 14.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 14.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 14.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 14.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.7
FF:10153-102I9 76 years, female 62.8
FF:10169-103B7 60 years, female 44.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.3
Pig sample Sample description nTPM
Subiculum
nTPM: 41.5
Samples: 4

Max nTPM: 51.9
Min nTPM: 34.4
Sample A Female 51.9
Sample B Female 37.0
Sample C Male 42.6
Sample D Male 34.4
Dorsal hippocampus
nTPM: 39.0
Samples: 4

Max nTPM: 42.4
Min nTPM: 36.4
Sample A Female 40.4
Sample B Female 42.4
Sample C Male 36.4
Sample D Male 36.9
Entorhinal cortex
nTPM: 44.3
Samples: 4

Max nTPM: 48.7
Min nTPM: 41.0
Sample A Female 48.7
Sample B Female 41.0
Sample C Male 42.0
Sample D Male 45.3
Ventral hippocampus
nTPM: 38.9
Samples: 4

Max nTPM: 44.8
Min nTPM: 32.9
Sample A Female 35.3
Sample B Female 32.9
Sample C Male 44.8
Sample D Male 42.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.1
Samples: 4

Max nTPM: 54.7
Min nTPM: 32.3
Sample A Male 36.2
Sample B Male 37.0
Sample C Female 32.3
Sample D Female 54.7
Hippocampal formation
nTPM: 25.3
Samples: 4

Max nTPM: 34.1
Min nTPM: 18.6
Sample A Male 20.5
Sample B Male 28.1
Sample C Female 34.1
Sample D Female 18.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
73949403 Antisense, RP_051219_01_G09, Mouse strain C57BL/6J (56 days, male) 9.0

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