HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:0.3 nTPM
HPA Brain:20.3 nTPM
GTEx:0.3 nTPM
FANTOM5:7.2 Scaled Tags Per Million
Pig:4.4 nTPM
Mouse:0.2 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.3
Sample id Sample description nTPM
Hippocampus
nTPM: 16.3
2148 Female, age 91, left hemisphere 22.2
1911 Female, age 85, right hemisphere 19.6
2621 Female, age 67, right hemisphere 17.2
2529 Female, age 94, left hemisphere 14.5
1855 Male, age 76, left hemisphere 12.5
1898 Male, age 80, left hemisphere 11.9
Dentate gyrus
nTPM: 18.1
2531 Female, age 67, both hemispheres 24.5
1927 Female, age 91, both hemispheres 22.9
2246 Female, age 85, both hemispheres 16.0
2010 Male, age 76, both hemispheres 15.7
2528 Male, age 74, both hemispheres 15.4
2530 Female, age 94, left hemisphere 14.0
Entorhinal gyrus
nTPM: 15.3
2686 Male, age 75, right hemisphere 18.1
2613 Female, age 94, left hemisphere 16.6
2117 Female, age 91, right hemisphere 14.7
1787 Male, age 76, left hemisphere 14.6
1938 Female, age 85, left hemisphere 14.5
2764 Male, age 80, right hemisphere 13.3
Hippocampus, CA1
nTPM: 20.3
2749 Male, age 80, left hemisphere 30.3
2045 Male, age 76, both hemispheres 25.1
2527 Male, age 74, both hemispheres 17.2
1873 Female, age 85, both hemispheres 15.6
2082 Female, age 91, right hemisphere 13.3
Hippocampus, CA2
nTPM: 15.6
1963 Male, age 80, left hemisphere 16.8
1940 Female, age 85, left hemisphere 16.6
1892 Male, age 76, both hemispheres 16.2
2113 Female, age 91, right hemisphere 16.1
2437 Female, age 94, left hemisphere 14.5
2249 Male, age 74, both hemispheres 13.6
Hippocampus, CA3
nTPM: 19.9
2137 Male, age 80, left hemisphere 28.9
2620 Female, age 94, left hemisphere 23.5
2861 Female, age 67, both hemispheres 20.0
1867 Male, age 76, both hemispheres 18.4
1891 Female, age 85, both hemispheres 15.0
2436 Male, age 74, both hemispheres 13.7
Parahippocampal cortex
nTPM: 15.8
2245 Female, age 91, both hemispheres 18.8
2622 Female, age 67, right hemisphere 17.6
2250 Female, age 67, right hemisphere 17.3
2693 Female, age 94, both hemispheres 17.3
1990 Female, age 91, right hemisphere 17.2
2532 Female, age 72, left hemisphere 17.1
1933 Female, age 85, both hemispheres 14.7
2018 Male, age 76, both hemispheres 14.3
2692 Male, age 74, both hemispheres 12.3
1850 Male, age 80, both hemispheres 11.4
Perirhinal gyrus
nTPM: 14.7
2848 Male, age 76, right hemisphere 18.5
2521 Female, age 94, right hemisphere 15.1
1841 Female, age 85, right hemisphere 14.3
1794 Male, age 80, right hemisphere 13.3
1847 Female, age 91, left hemisphere 12.4
Subiculum
nTPM: 15.7
2729 Female, age 91, right hemisphere 18.7
1901 Male, age 80, both hemispheres 16.4
2042 Male, age 76, both hemispheres 15.5
2438 Female, age 94, left hemisphere 15.4
2619 Male, age 74, both hemispheres 14.9
1977 Female, age 85, both hemispheres 13.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 0.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 0.3
Samples: 197

Max nTPM: 0.7
Min nTPM: 0.0
Std nTPM: 0.1
Median nTPM: 0.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 0.7
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 0.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 0.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 0.7
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 0.6
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 0.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 0.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 0.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 0.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 0.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 0.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.2
FF:10153-102I9 76 years, female 9.3
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.4
Pig sample Sample description nTPM
Subiculum
nTPM: 2.8
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.3
Sample A Female 3.2
Sample B Female 2.5
Sample C Male 3.3
Sample D Male 2.3
Dorsal hippocampus
nTPM: 4.4
Samples: 4

Max nTPM: 6.5
Min nTPM: 2.7
Sample A Female 2.7
Sample B Female 5.0
Sample C Male 3.5
Sample D Male 6.5
Entorhinal cortex
nTPM: 4.1
Samples: 4

Max nTPM: 6.2
Min nTPM: 2.7
Sample A Female 3.5
Sample B Female 3.9
Sample C Male 2.7
Sample D Male 6.2
Ventral hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 5.6
Min nTPM: 2.9
Sample A Female 3.1
Sample B Female 5.6
Sample C Male 2.9
Sample D Male 5.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.2
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.1
Sample A Male 0.1
Sample B Male 0.2
Sample C Female 0.2
Sample D Female 0.4
Hippocampal formation
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.1
Sample C Female 0.1
Sample D Female 0.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
70542954 Antisense, RP_050329_01_E07, Mouse strain C57BL/6J (56 days, male) 1.6

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