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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
17.5
nTPM
Monaco:
68.7
nTPM
Schmiedel:
81.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.5
HPA sample
nTPM
gdT-cell nTPM: 15.4
Samples: 6
Max nTPM: 19.2
Min nTPM: 10.9
P10809_1007
14.5
P10809_1022
18.7
P10809_1041
19.2
P10809_1060
13.0
P10809_1077
16.0
P10809_1098
10.9
MAIT T-cell nTPM: 17.5
Samples: 6
Max nTPM: 23.6
Min nTPM: 13.3
P10809_1006
23.6
P10809_1024
19.4
P10809_1043
15.9
P10809_1062
15.0
P10809_1083
13.3
P10809_1097
17.5
Memory CD4 T-cell nTPM: 14.8
Samples: 6
Max nTPM: 19.1
Min nTPM: 9.5
P10809_1014
18.5
P10809_1026
9.5
P10809_1045
19.1
P10809_1064
11.9
P10809_1086
13.7
P10809_1113
16.2
Memory CD8 T-cell nTPM: 13.8
Samples: 5
Max nTPM: 16.3
Min nTPM: 11.9
P10809_1012
13.9
P10809_1027
12.3
P10809_1046
14.8
P10809_1065
11.9
P10809_1111
16.3
Naive CD4 T-cell nTPM: 16.8
Samples: 6
Max nTPM: 22.8
Min nTPM: 11.2
P10809_1015
22.8
P10809_1030
14.6
P10809_1049
13.7
P10809_1068
21.1
P10809_1085
11.2
P10809_1112
17.2
Naive CD8 T-cell nTPM: 13.7
Samples: 6
Max nTPM: 15.7
Min nTPM: 11.9
P10809_1016
15.7
P10809_1031
12.4
P10809_1050
13.9
P10809_1069
14.2
P10809_1087
13.9
P10809_1110
11.9
T-reg nTPM: 7.7
Samples: 6
Max nTPM: 13.5
Min nTPM: 2.4
P10809_1018
8.5
P10809_1037
13.5
P10809_1056
9.7
P10809_1075
8.0
P10809_1094
2.4
P10809_1106
4.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 58.3
Samples: 4
Max nTPM: 74.5
Min nTPM: 42.9
RHH5202_R3573
57.1
RHH5230_R3602
42.9
RHH5259_R3631
74.5
RHH5288_R3660
58.7
Effector memory CD8 T-cell nTPM: 46.1
Samples: 4
Max nTPM: 52.1
Min nTPM: 38.0
RHH5203_R3574
52.1
RHH5231_R3603
38.0
RHH5260_R3632
50.5
RHH5289_R3661
43.9
MAIT T-cell nTPM: 40.2
Samples: 4
Max nTPM: 51.1
Min nTPM: 30.7
RHH5233_R3605
51.1
RHH5205_R3576
36.4
RHH5262_R3634
42.6
RHH5297_R3663
30.7
Memory CD4 T-cell TFH nTPM: 60.2
Samples: 4
Max nTPM: 77.3
Min nTPM: 48.2
RHH5300_R3666
58.6
RHH5236_R3608
48.2
RHH5265_R3637
77.3
RHH5208_R3579
56.8
Memory CD4 T-cell Th1 nTPM: 63.3
Samples: 4
Max nTPM: 73.3
Min nTPM: 55.5
RHH5210_R3581
55.5
RHH5302_R3668
61.1
RHH5238_R3610
73.3
RHH5267_R3639
63.3
Memory CD4 T-cell Th1/Th17 nTPM: 63.1
Samples: 4
Max nTPM: 81.6
Min nTPM: 40.6
RHH5303_R3669
54.3
RHH5211_R3582
40.6
RHH5239_R3611
81.6
RHH5268_R3640
75.7
Memory CD4 T-cell Th17 nTPM: 49.0
Samples: 4
Max nTPM: 58.3
Min nTPM: 36.1
RHH5304_R3670
58.3
RHH5212_R3583
36.1
RHH5240_R3612
52.7
RHH5269_R3641
48.7
Memory CD4 T-cell Th2 nTPM: 58.3
Samples: 4
Max nTPM: 63.9
Min nTPM: 51.9
RHH5305_R3671
53.8
RHH5213_R3584
51.9
RHH5241_R3613
63.5
RHH5270_R3642
63.9
Naive CD4 T-cell nTPM: 68.7
Samples: 4
Max nTPM: 82.6
Min nTPM: 58.7
RHH5306_R3672
71.6
RHH5214_R3585
58.7
RHH5242_R3614
61.8
RHH5271_R3643
82.6
Naive CD8 T-cell nTPM: 56.4
Samples: 4
Max nTPM: 59.8
Min nTPM: 52.8
RHH5201_R3572
52.8
RHH5229_R3601
59.8
RHH5258_R3630
57.4
RHH5287_R3659
55.4
Non-Vd2 gdTCR nTPM: 31.0
Samples: 4
Max nTPM: 32.7
Min nTPM: 27.6
RHH5235_R3607
27.6
RHH5264_R3636
32.7
RHH5207_R3578
32.1
RHH5299_R3665
31.4
T-reg nTPM: 48.3
Samples: 4
Max nTPM: 55.7
Min nTPM: 42.8
RHH5301_R3667
42.8
RHH5237_R3609
50.7
RHH5266_R3638
55.7
RHH5209_R3580
43.8
Terminal effector memory CD4 T-cell nTPM: 44.0
Samples: 2
Max nTPM: 52.4
Min nTPM: 35.6
RHH5243_R3615
35.6
RHH5272_R3644
52.4
Terminal effector memory CD8 T-cell nTPM: 36.6
Samples: 4
Max nTPM: 41.3
Min nTPM: 27.1
RHH5232_R3604
41.3
RHH5204_R3575
27.1
RHH5261_R3633
40.8
RHH5296_R3662
37.0
Vd2 gdTCR nTPM: 41.8
Samples: 4
Max nTPM: 53.2
Min nTPM: 23.9
RHH5234_R3606
53.2
RHH5206_R3577
23.9
RHH5263_R3635
51.8
RHH5298_R3664
38.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
