HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Neuronal projections: Not detected
Synapses: Medium
Mouse brain, Intensity
Hippocampal formationi 		134.148
RNA expressioni
Consensus:19.6 nTPM
HPA Brain:155.3 nTPM
GTEx:19.6 nTPM
FANTOM5:61.9 Scaled Tags Per Million
Pig:117.5 nTPM
Mouse:171.5 nTPM
Allen mouse:9.9 Expression energy

HIPPOCAMPUS - Extended tissue profilei , antibody CAB001948
Glial cells Not detected
Neuronal cells Not detected
Neuronal projections Not detected
Synapses Medium

HIPPOCAMPUS - Extended tissue profilei , antibody HPA044496
Glial cells Not detected
Neuronal cells High
Neuronal projections Not detected
Synapses Not detected

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044496Antibody CAB001948
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA044496
Hippocampal formation mean intensity 134.148
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 108.600
Molecular layer of the dentate gyrus 125.130
Granular dentate gyrus 114.111
CA1 - oriens layer 128.474
CA1 - pyramidal layer 121.644
CA1 - radiatum layer 129.772
CA2 - oriens layer 120.178
CA2 - pyramidal layer 115.226
CA2 - radiatum layer 127.043
CA3 - oriens layer 110.203
CA3 - pyramidal layer 109.456
CA3 - radiatum layer 120.056
Stratum lucidum 134.148
Lacunosum moleculare 123.326
Subiculum 98.958

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 155.3
Sample id Sample description nTPM
Hippocampus
nTPM: 144.2
1898 Male, age 80, left hemisphere 192.8
2148 Female, age 91, left hemisphere 173.7
2621 Female, age 67, right hemisphere 171.0
1855 Male, age 76, left hemisphere 149.1
1911 Female, age 85, right hemisphere 102.3
2529 Female, age 94, left hemisphere 76.2
Dentate gyrus
nTPM: 153.3
1927 Female, age 91, both hemispheres 226.0
2010 Male, age 76, both hemispheres 152.4
2531 Female, age 67, both hemispheres 150.4
2530 Female, age 94, left hemisphere 139.9
2246 Female, age 85, both hemispheres 130.0
2528 Male, age 74, both hemispheres 121.0
Entorhinal gyrus
nTPM: 124.7
2613 Female, age 94, left hemisphere 196.7
2764 Male, age 80, right hemisphere 150.2
1938 Female, age 85, left hemisphere 132.3
1787 Male, age 76, left hemisphere 106.0
2686 Male, age 75, right hemisphere 89.7
2117 Female, age 91, right hemisphere 73.3
Hippocampus, CA1
nTPM: 155.3
2749 Male, age 80, left hemisphere 252.9
1873 Female, age 85, both hemispheres 208.4
2045 Male, age 76, both hemispheres 148.5
2527 Male, age 74, both hemispheres 99.4
2082 Female, age 91, right hemisphere 67.5
Hippocampus, CA2
nTPM: 131.7
1963 Male, age 80, left hemisphere 245.9
1892 Male, age 76, both hemispheres 180.5
2437 Female, age 94, left hemisphere 114.4
2249 Male, age 74, both hemispheres 95.2
1940 Female, age 85, left hemisphere 78.1
2113 Female, age 91, right hemisphere 75.9
Hippocampus, CA3
nTPM: 140.4
2137 Male, age 80, left hemisphere 189.7
2620 Female, age 94, left hemisphere 181.8
2861 Female, age 67, both hemispheres 170.8
1867 Male, age 76, both hemispheres 109.4
1891 Female, age 85, both hemispheres 95.5
2436 Male, age 74, both hemispheres 95.5
Parahippocampal cortex
nTPM: 113.3
1990 Female, age 91, right hemisphere 131.0
2245 Female, age 91, both hemispheres 130.2
2532 Female, age 72, left hemisphere 130.0
1850 Male, age 80, both hemispheres 127.3
2622 Female, age 67, right hemisphere 116.4
1933 Female, age 85, both hemispheres 116.2
2693 Female, age 94, both hemispheres 110.2
2250 Female, age 67, right hemisphere 97.9
2692 Male, age 74, both hemispheres 87.8
2018 Male, age 76, both hemispheres 86.2
Perirhinal gyrus
nTPM: 127.8
1847 Female, age 91, left hemisphere 173.2
2521 Female, age 94, right hemisphere 132.2
1794 Male, age 80, right hemisphere 125.3
1841 Female, age 85, right hemisphere 108.5
2848 Male, age 76, right hemisphere 99.8
Subiculum
nTPM: 94.9
1901 Male, age 80, both hemispheres 110.9
1977 Female, age 85, both hemispheres 107.8
2729 Female, age 91, right hemisphere 103.3
2438 Female, age 94, left hemisphere 98.0
2619 Male, age 74, both hemispheres 81.4
2042 Male, age 76, both hemispheres 67.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.6
Samples: 197

Max nTPM: 94.6
Min nTPM: 2.8
Std nTPM: 15.2
Median nTPM: 15.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 94.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 72.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 71.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 67.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 64.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 56.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 56.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 55.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 54.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 52.3
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 49.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.9
FF:10169-103B7 60 years, female 89.3
FF:10153-102I9 76 years, female 34.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 117.5
Pig sample Sample description nTPM
Subiculum
nTPM: 84.3
Samples: 4

Max nTPM: 102.8
Min nTPM: 71.1
Sample A Female 102.8
Sample B Female 79.4
Sample C Male 83.8
Sample D Male 71.1
Dorsal hippocampus
nTPM: 117.5
Samples: 4

Max nTPM: 144.1
Min nTPM: 78.2
Sample A Female 144.1
Sample B Female 129.9
Sample C Male 78.2
Sample D Male 117.8
Entorhinal cortex
nTPM: 81.5
Samples: 4

Max nTPM: 93.9
Min nTPM: 75.2
Sample A Female 78.7
Sample B Female 78.1
Sample C Male 93.9
Sample D Male 75.2
Ventral hippocampus
nTPM: 94.0
Samples: 4

Max nTPM: 108.0
Min nTPM: 65.6
Sample A Female 108.0
Sample B Female 65.6
Sample C Male 98.7
Sample D Male 103.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 171.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 122.9
Samples: 4

Max nTPM: 147.1
Min nTPM: 110.7
Sample A Male 117.1
Sample B Male 110.7
Sample C Female 116.8
Sample D Female 147.1
Hippocampal formation
nTPM: 171.5
Samples: 4

Max nTPM: 207.7
Min nTPM: 136.6
Sample A Male 143.6
Sample B Male 198.1
Sample C Female 207.7
Sample D Female 136.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.9
69817312 Antisense, RP_050510_03_B02, Mouse strain C57BL/6J (56 days, male) 19.1
75991096 Antisense, RP_060608_01_H08, Mouse strain C57BL/6J (56 days, male) 0.6

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