We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
64.0
nTPM
Monaco:
143.1
nTPM
Schmiedel:
89.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
64.0
HPA sample
nTPM
gdT-cell nTPM: 64.0
Samples: 6
Max nTPM: 88.2
Min nTPM: 51.1
P10809_1007
51.1
P10809_1022
74.0
P10809_1041
88.2
P10809_1060
53.2
P10809_1077
58.9
P10809_1098
58.4
MAIT T-cell nTPM: 34.3
Samples: 6
Max nTPM: 43.2
Min nTPM: 26.9
P10809_1006
37.6
P10809_1024
30.3
P10809_1043
32.5
P10809_1062
26.9
P10809_1083
43.2
P10809_1097
35.1
Memory CD4 T-cell nTPM: 44.7
Samples: 6
Max nTPM: 55.3
Min nTPM: 37.1
P10809_1014
39.6
P10809_1026
48.6
P10809_1045
55.3
P10809_1064
37.1
P10809_1086
41.5
P10809_1113
45.8
Memory CD8 T-cell nTPM: 53.1
Samples: 5
Max nTPM: 65.5
Min nTPM: 47.8
P10809_1012
47.8
P10809_1027
51.5
P10809_1046
65.5
P10809_1065
50.3
P10809_1111
50.2
Naive CD4 T-cell nTPM: 39.9
Samples: 6
Max nTPM: 50.0
Min nTPM: 30.5
P10809_1015
31.5
P10809_1030
30.5
P10809_1049
40.3
P10809_1068
42.8
P10809_1085
50.0
P10809_1112
44.5
Naive CD8 T-cell nTPM: 43.8
Samples: 6
Max nTPM: 52.6
Min nTPM: 33.8
P10809_1016
33.8
P10809_1031
52.6
P10809_1050
48.4
P10809_1069
35.5
P10809_1087
47.7
P10809_1110
44.5
T-reg nTPM: 60.5
Samples: 6
Max nTPM: 90.3
Min nTPM: 49.9
P10809_1018
63.3
P10809_1037
56.9
P10809_1056
51.8
P10809_1075
49.9
P10809_1094
90.3
P10809_1106
50.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
143.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 103.2
Samples: 4
Max nTPM: 148.6
Min nTPM: 79.7
RHH5202_R3573
102.5
RHH5230_R3602
148.6
RHH5259_R3631
79.7
RHH5288_R3660
82.1
Effector memory CD8 T-cell nTPM: 114.6
Samples: 4
Max nTPM: 118.6
Min nTPM: 107.3
RHH5203_R3574
114.9
RHH5231_R3603
118.6
RHH5260_R3632
117.7
RHH5289_R3661
107.3
MAIT T-cell nTPM: 83.7
Samples: 4
Max nTPM: 98.2
Min nTPM: 73.4
RHH5233_R3605
98.2
RHH5205_R3576
87.3
RHH5262_R3634
73.4
RHH5297_R3663
75.8
Memory CD4 T-cell TFH nTPM: 84.3
Samples: 4
Max nTPM: 98.5
Min nTPM: 64.0
RHH5300_R3666
83.6
RHH5236_R3608
64.0
RHH5265_R3637
98.5
RHH5208_R3579
90.9
Memory CD4 T-cell Th1 nTPM: 87.9
Samples: 4
Max nTPM: 100.8
Min nTPM: 80.8
RHH5210_R3581
83.6
RHH5302_R3668
80.8
RHH5238_R3610
86.2
RHH5267_R3639
100.8
Memory CD4 T-cell Th1/Th17 nTPM: 81.6
Samples: 4
Max nTPM: 101.4
Min nTPM: 68.6
RHH5303_R3669
81.8
RHH5211_R3582
101.4
RHH5239_R3611
74.6
RHH5268_R3640
68.6
Memory CD4 T-cell Th17 nTPM: 88.0
Samples: 4
Max nTPM: 106.4
Min nTPM: 76.2
RHH5304_R3670
76.7
RHH5212_R3583
92.6
RHH5240_R3612
106.4
RHH5269_R3641
76.2
Memory CD4 T-cell Th2 nTPM: 96.2
Samples: 4
Max nTPM: 113.7
Min nTPM: 87.6
RHH5305_R3671
87.6
RHH5213_R3584
89.7
RHH5241_R3613
113.7
RHH5270_R3642
93.8
Naive CD4 T-cell nTPM: 73.0
Samples: 4
Max nTPM: 83.5
Min nTPM: 64.0
RHH5306_R3672
70.8
RHH5214_R3585
73.5
RHH5242_R3614
83.5
RHH5271_R3643
64.0
Naive CD8 T-cell nTPM: 62.4
Samples: 4
Max nTPM: 69.2
Min nTPM: 47.0
RHH5201_R3572
69.2
RHH5229_R3601
47.0
RHH5258_R3630
65.0
RHH5287_R3659
68.5
Non-Vd2 gdTCR nTPM: 143.1
Samples: 4
Max nTPM: 152.2
Min nTPM: 133.3
RHH5235_R3607
152.2
RHH5264_R3636
139.7
RHH5207_R3578
147.2
RHH5299_R3665
133.3
T-reg nTPM: 86.7
Samples: 4
Max nTPM: 93.3
Min nTPM: 80.3
RHH5301_R3667
86.2
RHH5237_R3609
93.3
RHH5266_R3638
86.9
RHH5209_R3580
80.3
Terminal effector memory CD4 T-cell nTPM: 129.9
Samples: 2
Max nTPM: 136.1
Min nTPM: 123.7
RHH5243_R3615
136.1
RHH5272_R3644
123.7
Terminal effector memory CD8 T-cell nTPM: 133.3
Samples: 4
Max nTPM: 150.9
Min nTPM: 115.4
RHH5232_R3604
134.8
RHH5204_R3575
115.4
RHH5261_R3633
131.9
RHH5296_R3662
150.9
Vd2 gdTCR nTPM: 100.2
Samples: 4
Max nTPM: 113.7
Min nTPM: 79.6
RHH5234_R3606
113.7
RHH5206_R3577
113.7
RHH5263_R3635
79.6
RHH5298_R3664
93.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
