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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
224.7
nTPM
Monaco:
88.4
nTPM
Schmiedel:
32.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
224.7
HPA sample
nTPM
gdT-cell nTPM: 149.7
Samples: 6
Max nTPM: 196.8
Min nTPM: 115.9
P10809_1007
115.9
P10809_1022
161.8
P10809_1041
158.9
P10809_1060
142.9
P10809_1077
121.7
P10809_1098
196.8
MAIT T-cell nTPM: 121.1
Samples: 6
Max nTPM: 185.1
Min nTPM: 82.6
P10809_1006
82.6
P10809_1024
110.1
P10809_1043
115.8
P10809_1062
127.1
P10809_1083
105.8
P10809_1097
185.1
Memory CD4 T-cell nTPM: 150.2
Samples: 6
Max nTPM: 199.5
Min nTPM: 97.6
P10809_1014
97.6
P10809_1026
199.5
P10809_1045
133.2
P10809_1064
162.0
P10809_1086
128.4
P10809_1113
180.5
Memory CD8 T-cell nTPM: 134.2
Samples: 5
Max nTPM: 154.9
Min nTPM: 105.4
P10809_1012
105.4
P10809_1027
151.7
P10809_1046
133.4
P10809_1065
125.5
P10809_1111
154.9
Naive CD4 T-cell nTPM: 124.6
Samples: 6
Max nTPM: 171.3
Min nTPM: 68.6
P10809_1015
68.6
P10809_1030
103.9
P10809_1049
171.3
P10809_1068
138.1
P10809_1085
109.8
P10809_1112
155.8
Naive CD8 T-cell nTPM: 121.1
Samples: 6
Max nTPM: 160.3
Min nTPM: 83.9
P10809_1016
83.9
P10809_1031
101.7
P10809_1050
109.2
P10809_1069
140.8
P10809_1087
130.9
P10809_1110
160.3
T-reg nTPM: 224.7
Samples: 6
Max nTPM: 275.0
Min nTPM: 159.6
P10809_1018
159.6
P10809_1037
194.6
P10809_1056
236.2
P10809_1075
219.0
P10809_1094
263.9
P10809_1106
275.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
88.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 49.0
Samples: 4
Max nTPM: 78.6
Min nTPM: 36.3
RHH5202_R3573
36.6
RHH5230_R3602
36.3
RHH5259_R3631
44.5
RHH5288_R3660
78.6
Effector memory CD8 T-cell nTPM: 44.8
Samples: 4
Max nTPM: 56.8
Min nTPM: 27.1
RHH5203_R3574
56.8
RHH5231_R3603
51.9
RHH5260_R3632
43.4
RHH5289_R3661
27.1
MAIT T-cell nTPM: 42.2
Samples: 4
Max nTPM: 52.8
Min nTPM: 30.7
RHH5233_R3605
42.0
RHH5205_R3576
30.7
RHH5262_R3634
43.4
RHH5297_R3663
52.8
Memory CD4 T-cell TFH nTPM: 44.5
Samples: 4
Max nTPM: 68.5
Min nTPM: 28.0
RHH5300_R3666
50.4
RHH5236_R3608
68.5
RHH5265_R3637
31.2
RHH5208_R3579
28.0
Memory CD4 T-cell Th1 nTPM: 50.6
Samples: 4
Max nTPM: 62.7
Min nTPM: 40.2
RHH5210_R3581
45.9
RHH5302_R3668
62.7
RHH5238_R3610
53.4
RHH5267_R3639
40.2
Memory CD4 T-cell Th1/Th17 nTPM: 45.9
Samples: 4
Max nTPM: 61.1
Min nTPM: 29.9
RHH5303_R3669
52.9
RHH5211_R3582
61.1
RHH5239_R3611
29.9
RHH5268_R3640
39.8
Memory CD4 T-cell Th17 nTPM: 44.1
Samples: 4
Max nTPM: 68.5
Min nTPM: 30.2
RHH5304_R3670
39.9
RHH5212_R3583
68.5
RHH5240_R3612
37.9
RHH5269_R3641
30.2
Memory CD4 T-cell Th2 nTPM: 43.8
Samples: 4
Max nTPM: 47.2
Min nTPM: 40.0
RHH5305_R3671
47.2
RHH5213_R3584
41.0
RHH5241_R3613
47.1
RHH5270_R3642
40.0
Naive CD4 T-cell nTPM: 41.9
Samples: 4
Max nTPM: 64.3
Min nTPM: 22.1
RHH5306_R3672
56.2
RHH5214_R3585
64.3
RHH5242_R3614
24.8
RHH5271_R3643
22.1
Naive CD8 T-cell nTPM: 24.9
Samples: 4
Max nTPM: 33.3
Min nTPM: 10.9
RHH5201_R3572
10.9
RHH5229_R3601
29.8
RHH5258_R3630
33.3
RHH5287_R3659
25.7
Non-Vd2 gdTCR nTPM: 81.2
Samples: 4
Max nTPM: 112.6
Min nTPM: 53.5
RHH5235_R3607
53.5
RHH5264_R3636
79.5
RHH5207_R3578
79.2
RHH5299_R3665
112.6
T-reg nTPM: 56.4
Samples: 4
Max nTPM: 79.4
Min nTPM: 35.7
RHH5301_R3667
79.4
RHH5237_R3609
50.1
RHH5266_R3638
35.7
RHH5209_R3580
60.4
Terminal effector memory CD4 T-cell nTPM: 37.0
Samples: 2
Max nTPM: 37.7
Min nTPM: 36.3
RHH5243_R3615
36.3
RHH5272_R3644
37.7
Terminal effector memory CD8 T-cell nTPM: 88.4
Samples: 4
Max nTPM: 180.4
Min nTPM: 54.8
RHH5232_R3604
54.8
RHH5204_R3575
180.4
RHH5261_R3633
55.5
RHH5296_R3662
62.8
Vd2 gdTCR nTPM: 78.8
Samples: 4
Max nTPM: 135.9
Min nTPM: 40.4
RHH5234_R3606
41.9
RHH5206_R3577
135.9
RHH5263_R3635
40.4
RHH5298_R3664
97.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
