HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:22.6 nTPM
HPA Brain:20.3 nTPM
GTEx:22.6 nTPM
FANTOM5:29.3 Scaled Tags Per Million
Pig:19.5 nTPM
Mouse:24.0 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038370
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.3
Sample id Sample description nTPM
Hippocampus
nTPM: 19.7
2621 Female, age 67, right hemisphere 23.9
2529 Female, age 94, left hemisphere 21.4
1855 Male, age 76, left hemisphere 20.7
2148 Female, age 91, left hemisphere 18.4
1911 Female, age 85, right hemisphere 17.5
1898 Male, age 80, left hemisphere 16.5
Dentate gyrus
nTPM: 20.3
2531 Female, age 67, both hemispheres 25.8
2530 Female, age 94, left hemisphere 25.0
2246 Female, age 85, both hemispheres 20.8
2010 Male, age 76, both hemispheres 19.4
1927 Female, age 91, both hemispheres 16.5
2528 Male, age 74, both hemispheres 14.5
Entorhinal gyrus
nTPM: 19.8
2686 Male, age 75, right hemisphere 23.8
2764 Male, age 80, right hemisphere 20.3
2613 Female, age 94, left hemisphere 20.1
1938 Female, age 85, left hemisphere 18.9
1787 Male, age 76, left hemisphere 18.0
2117 Female, age 91, right hemisphere 17.9
Hippocampus, CA1
nTPM: 15.3
2082 Female, age 91, right hemisphere 16.0
2527 Male, age 74, both hemispheres 15.6
1873 Female, age 85, both hemispheres 15.5
2045 Male, age 76, both hemispheres 15.5
2749 Male, age 80, left hemisphere 13.7
Hippocampus, CA2
nTPM: 18.3
2437 Female, age 94, left hemisphere 22.6
1892 Male, age 76, both hemispheres 20.6
1940 Female, age 85, left hemisphere 20.3
1963 Male, age 80, left hemisphere 18.8
2113 Female, age 91, right hemisphere 14.6
2249 Male, age 74, both hemispheres 12.6
Hippocampus, CA3
nTPM: 18.4
1891 Female, age 85, both hemispheres 21.4
2861 Female, age 67, both hemispheres 21.1
2137 Male, age 80, left hemisphere 18.9
2620 Female, age 94, left hemisphere 18.4
1867 Male, age 76, both hemispheres 17.4
2436 Male, age 74, both hemispheres 13.6
Parahippocampal cortex
nTPM: 19.1
2532 Female, age 72, left hemisphere 25.1
2245 Female, age 91, both hemispheres 23.8
1933 Female, age 85, both hemispheres 20.6
1990 Female, age 91, right hemisphere 18.4
2018 Male, age 76, both hemispheres 18.3
2622 Female, age 67, right hemisphere 18.0
1850 Male, age 80, both hemispheres 17.5
2692 Male, age 74, both hemispheres 17.2
2250 Female, age 67, right hemisphere 17.1
2693 Female, age 94, both hemispheres 14.9
Perirhinal gyrus
nTPM: 16.8
2848 Male, age 76, right hemisphere 17.9
1841 Female, age 85, right hemisphere 17.7
1847 Female, age 91, left hemisphere 17.4
1794 Male, age 80, right hemisphere 15.6
2521 Female, age 94, right hemisphere 15.2
Subiculum
nTPM: 20.3
2438 Female, age 94, left hemisphere 28.9
1977 Female, age 85, both hemispheres 22.3
2619 Male, age 74, both hemispheres 17.8
1901 Male, age 80, both hemispheres 17.7
2042 Male, age 76, both hemispheres 17.5
2729 Female, age 91, right hemisphere 17.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.6
Samples: 197

Max nTPM: 38.0
Min nTPM: 13.1
Std nTPM: 4.9
Median nTPM: 22.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 38.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 37.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 37.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 36.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 36.8
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 35.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 35.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 34.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 34.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 33.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 32.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.3
FF:10169-103B7 60 years, female 30.1
FF:10153-102I9 76 years, female 28.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.5
Pig sample Sample description nTPM
Subiculum
nTPM: 18.3
Samples: 4

Max nTPM: 18.8
Min nTPM: 17.5
Sample A Female 17.5
Sample B Female 18.8
Sample C Male 18.2
Sample D Male 18.7
Dorsal hippocampus
nTPM: 19.5
Samples: 4

Max nTPM: 21.1
Min nTPM: 17.7
Sample A Female 18.2
Sample B Female 21.1
Sample C Male 17.7
Sample D Male 21.1
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 18.7
Min nTPM: 16.1
Sample A Female 17.8
Sample B Female 16.1
Sample C Male 17.7
Sample D Male 18.7
Ventral hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 20.1
Min nTPM: 18.0
Sample A Female 20.1
Sample B Female 19.9
Sample C Male 18.0
Sample D Male 19.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.1
Samples: 4

Max nTPM: 24.4
Min nTPM: 20.8
Sample A Male 23.2
Sample B Male 24.4
Sample C Female 24.1
Sample D Female 20.8
Hippocampal formation
nTPM: 24.0
Samples: 4

Max nTPM: 26.8
Min nTPM: 22.1
Sample A Male 26.8
Sample B Male 22.1
Sample C Female 23.5
Sample D Female 23.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
2203 Antisense, RP_040604_01_C01, Mouse strain C57BL/6J (56 days, male) 0.4
2204 Antisense, RP_040604_01_C01, Mouse strain C57BL/6J (56 days, male) 0.0

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