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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
144.5
nTPM
Monaco:
56.4
nTPM
Schmiedel:
44.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
144.5
HPA sample
nTPM
gdT-cell nTPM: 75.8
Samples: 6
Max nTPM: 90.3
Min nTPM: 53.2
P10809_1007
53.2
P10809_1022
71.2
P10809_1041
90.3
P10809_1060
73.0
P10809_1077
87.9
P10809_1098
79.1
MAIT T-cell nTPM: 96.8
Samples: 6
Max nTPM: 115.5
Min nTPM: 67.8
P10809_1006
67.8
P10809_1024
114.2
P10809_1043
93.8
P10809_1062
91.0
P10809_1083
98.3
P10809_1097
115.5
Memory CD4 T-cell nTPM: 93.4
Samples: 6
Max nTPM: 111.4
Min nTPM: 74.1
P10809_1014
74.1
P10809_1026
82.5
P10809_1045
111.4
P10809_1064
93.4
P10809_1086
93.8
P10809_1113
105.4
Memory CD8 T-cell nTPM: 87.9
Samples: 5
Max nTPM: 99.6
Min nTPM: 69.0
P10809_1012
80.6
P10809_1027
94.4
P10809_1046
96.1
P10809_1065
99.6
P10809_1111
69.0
Naive CD4 T-cell nTPM: 89.7
Samples: 6
Max nTPM: 130.9
Min nTPM: 56.8
P10809_1015
56.8
P10809_1030
95.2
P10809_1049
130.9
P10809_1068
72.8
P10809_1085
102.1
P10809_1112
80.6
Naive CD8 T-cell nTPM: 78.4
Samples: 6
Max nTPM: 98.2
Min nTPM: 58.6
P10809_1016
58.6
P10809_1031
79.5
P10809_1050
85.9
P10809_1069
98.2
P10809_1087
71.3
P10809_1110
77.0
T-reg nTPM: 144.5
Samples: 6
Max nTPM: 207.6
Min nTPM: 98.1
P10809_1018
98.1
P10809_1037
143.4
P10809_1056
207.6
P10809_1075
139.6
P10809_1094
126.2
P10809_1106
152.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
56.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 34.5
Samples: 4
Max nTPM: 41.7
Min nTPM: 24.9
RHH5202_R3573
24.9
RHH5230_R3602
38.4
RHH5259_R3631
32.9
RHH5288_R3660
41.7
Effector memory CD8 T-cell nTPM: 32.3
Samples: 4
Max nTPM: 37.0
Min nTPM: 25.0
RHH5203_R3574
37.0
RHH5231_R3603
32.4
RHH5260_R3632
25.0
RHH5289_R3661
34.7
MAIT T-cell nTPM: 35.2
Samples: 4
Max nTPM: 39.0
Min nTPM: 31.8
RHH5233_R3605
32.3
RHH5205_R3576
31.8
RHH5262_R3634
37.7
RHH5297_R3663
39.0
Memory CD4 T-cell TFH nTPM: 56.1
Samples: 4
Max nTPM: 68.1
Min nTPM: 39.9
RHH5300_R3666
59.6
RHH5236_R3608
68.1
RHH5265_R3637
39.9
RHH5208_R3579
56.7
Memory CD4 T-cell Th1 nTPM: 44.9
Samples: 4
Max nTPM: 77.6
Min nTPM: 22.0
RHH5210_R3581
22.0
RHH5302_R3668
77.6
RHH5238_R3610
34.0
RHH5267_R3639
46.0
Memory CD4 T-cell Th1/Th17 nTPM: 44.7
Samples: 4
Max nTPM: 63.7
Min nTPM: 27.1
RHH5303_R3669
63.7
RHH5211_R3582
47.6
RHH5239_R3611
27.1
RHH5268_R3640
40.4
Memory CD4 T-cell Th17 nTPM: 35.9
Samples: 4
Max nTPM: 45.9
Min nTPM: 26.4
RHH5304_R3670
41.0
RHH5212_R3583
45.9
RHH5240_R3612
30.2
RHH5269_R3641
26.4
Memory CD4 T-cell Th2 nTPM: 39.4
Samples: 4
Max nTPM: 48.0
Min nTPM: 28.4
RHH5305_R3671
47.6
RHH5213_R3584
33.5
RHH5241_R3613
48.0
RHH5270_R3642
28.4
Naive CD4 T-cell nTPM: 36.5
Samples: 4
Max nTPM: 47.2
Min nTPM: 23.6
RHH5306_R3672
43.3
RHH5214_R3585
47.2
RHH5242_R3614
31.7
RHH5271_R3643
23.6
Naive CD8 T-cell nTPM: 30.8
Samples: 4
Max nTPM: 39.0
Min nTPM: 27.4
RHH5201_R3572
39.0
RHH5229_R3601
28.9
RHH5258_R3630
28.0
RHH5287_R3659
27.4
Non-Vd2 gdTCR nTPM: 41.2
Samples: 4
Max nTPM: 51.2
Min nTPM: 25.3
RHH5235_R3607
25.3
RHH5264_R3636
51.2
RHH5207_R3578
45.8
RHH5299_R3665
42.5
T-reg nTPM: 48.8
Samples: 4
Max nTPM: 62.2
Min nTPM: 30.6
RHH5301_R3667
62.2
RHH5237_R3609
57.8
RHH5266_R3638
30.6
RHH5209_R3580
44.7
Terminal effector memory CD4 T-cell nTPM: 30.7
Samples: 2
Max nTPM: 35.3
Min nTPM: 26.0
RHH5243_R3615
26.0
RHH5272_R3644
35.3
Terminal effector memory CD8 T-cell nTPM: 46.5
Samples: 4
Max nTPM: 85.0
Min nTPM: 24.5
RHH5232_R3604
24.5
RHH5204_R3575
85.0
RHH5261_R3633
40.0
RHH5296_R3662
36.4
Vd2 gdTCR nTPM: 56.5
Samples: 4
Max nTPM: 74.9
Min nTPM: 39.2
RHH5234_R3606
40.4
RHH5206_R3577
74.9
RHH5263_R3635
39.2
RHH5298_R3664
71.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
