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                                  • PGAM1
                                  BRAIN MEDULLA OBLONGATA Show tissue menu
                                  AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
                                  MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
                                  ANTIBODIES
                                  AND
                                  VALIDATION
                                  Brain proteome
                                  Medulla oblongata
                                  MEDULLA OBLONGATA - Expression summary
                                  Protein expressioni

                                  On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

                                  Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

                                  If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                  No data
                                  RNA expressioni

                                  A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

                                  The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

                                  Scroll down to view mRNA expression data in more detail.
                                  HPA Brain:275.7 nTPM
                                  FANTOM5:57.3 Scaled Tags Per Million
                                  Allen mouse:19.4 Expression energy

                                  MEDULLA OBLONGATA - HPA Brain RNA-seq
                                  Max nTPM 275.7
                                  Sample id Sample description nTPM
                                  Area postrema
                                  nTPM: 168.0
                                  2054 Male, age 76, both hemispheres 194.8
                                  2799 Male, age 61, both hemispheres 176.8
                                  2306 Male, age 80, both hemispheres 132.4
                                  Dorsal medullary reticular nucleus
                                  nTPM: 230.1
                                  2040 Female, age 85, both hemispheres 324.8
                                  2088 Male, age 76, both hemispheres 191.9
                                  2373 Male, age 61, both hemispheres 173.6
                                  Dorsal motor vagal complex
                                  nTPM: 215.0
                                  2133 Female, age 91, both hemispheres 294.5
                                  2844 Male, age 55, unknown 277.2
                                  2000 Male, age 74, unknown 272.8
                                  2813 Female, age 72, unknown 209.3
                                  2643 Male, age 74, both hemispheres 197.8
                                  2797 Male, age 61, both hemispheres 193.8
                                  2185 Male, age 76, both hemispheres 162.1
                                  2807 Female, age 85, both hemispheres 112.1
                                  Gigantocellular reticular nuclei, medullary
                                  nTPM: 206.1
                                  1876 Female, age 85, both hemispheres 264.0
                                  2462 Male, age 74, both hemispheres 239.3
                                  2022 Male, age 76, right hemisphere 212.7
                                  2310 Male, age 80, both hemispheres 183.2
                                  2387 Female, age 91, both hemispheres 178.7
                                  2314 Male, age 61, both hemispheres 158.7
                                  Gigantocellular reticular nuclei, pars
                                  nTPM: 208.9
                                  2084 Female, age 85, both hemispheres 297.6
                                  2168 Male, age 76, both hemispheres 249.2
                                  2336 Male, age 61, both hemispheres 211.9
                                  2706 Male, age 80, both hemispheres 143.5
                                  2330 Male, age 80, both hemispheres 142.5
                                  Inferior olive
                                  nTPM: 204.2
                                  2563 Male, age 74, both hemispheres 294.5
                                  2085 Female, age 85, both hemispheres 239.9
                                  2379 Male, age 80, both hemispheres 175.8
                                  2628 Female, age 91, both hemispheres 159.6
                                  2178 Male, age 61, both hemispheres 151.3
                                  Lateral medullary reticular nucleus
                                  nTPM: 214.6
                                  2044 Male, age 76, both hemispheres 289.4
                                  2804 Female, age 91, both hemispheres 232.2
                                  2305 Male, age 74, both hemispheres 214.9
                                  2190 Female, age 85, both hemispheres 206.9
                                  2852 Male, age 80, both hemispheres 179.9
                                  2374 Male, age 61, both hemispheres 164.4
                                  Medial olivary nucleus
                                  nTPM: 172.0
                                  2138 Female, age 91, both hemispheres 229.3
                                  1962 Male, age 76, both hemispheres 174.0
                                  2851 Male, age 80, both hemispheres 147.1
                                  1943 Male, age 61, both hemispheres 137.8
                                  Medial vestibular nucleus
                                  nTPM: 258.8
                                  2134 Male, age 76, both hemispheres 283.3
                                  2093 Male, age 80, both hemispheres 272.7
                                  2743 Female, age 85, both hemispheres 272.7
                                  2803 Female, age 91, both hemispheres 249.7
                                  2801 Male, age 74, both hemispheres 246.7
                                  2624 Male, age 61, both hemispheres 227.3
                                  Motor hypoglossal nucleus
                                  nTPM: 224.7
                                  2125 Female, age 91, both hemispheres 276.5
                                  2132 Female, age 85, both hemispheres 244.2
                                  2461 Male, age 61, both hemispheres 219.1
                                  2277 Male, age 76, both hemispheres 198.7
                                  2182 Male, age 80, both hemispheres 184.9
                                  Nucleus ambiguus
                                  nTPM: 224.0
                                  2096 Female, age 85, both hemispheres 249.2
                                  2071 Male, age 76, both hemispheres 198.8
                                  Nucleus cuneatus
                                  nTPM: 183.3
                                  2564 Male, age 74, both hemispheres 274.1
                                  2131 Male, age 76, both hemispheres 218.6
                                  2562 Male, age 61, both hemispheres 210.6
                                  2100 Male, age 76, both hemispheres 189.9
                                  2376 Male, age 61, both hemispheres 187.6
                                  2805 Female, age 91, both hemispheres 163.9
                                  2381 Male, age 80, both hemispheres 140.3
                                  2380 Male, age 80, both hemispheres 138.5
                                  2808 Female, age 85, both hemispheres 126.2
                                  Nucleus gracilis
                                  nTPM: 149.3
                                  2627 Male, age 74, both hemispheres 215.3
                                  2299 Female, age 85, both hemispheres 119.3
                                  2382 Male, age 80, both hemispheres 113.3
                                  Nucleus raphe obscurus
                                  nTPM: 175.4
                                  2800 Male, age 61, midline 193.7
                                  2845 Female, age 85, midline 190.8
                                  2142 Male, age 76, midline 141.8
                                  Nucleus raphe pallidus
                                  nTPM: 213.5
                                  2183 Male, age 80, midline 268.6
                                  1924 Male, age 61, midline 232.7
                                  2145 Male, age 76, midline 139.3
                                  Nucleus tractus solitarii
                                  nTPM: 198.6
                                  2144 Female, age 91, right hemisphere 253.3
                                  2656 Male, age 76, both hemispheres 236.4
                                  2191 Female, age 85, both hemispheres 153.1
                                  2307 Male, age 80, both hemispheres 151.5
                                  Parvicellular reticular nuclei
                                  nTPM: 241.0
                                  2119 Male, age 80, both hemispheres 289.1
                                  2095 Male, age 76, both hemispheres 244.4
                                  2558 Male, age 74, both hemispheres 189.4
                                  Parvicellular reticular nuclei, medullary
                                  nTPM: 254.9
                                  2189 Female, age 91, both hemispheres 281.1
                                  2091 Female, age 85, both hemispheres 263.6
                                  2181 Male, age 80, left hemisphere 220.1
                                  Peritrigeminal nucleus
                                  nTPM: 265.4
                                  2067 Female, age 85, both hemispheres 277.5
                                  2136 Male, age 76, both hemispheres 263.9
                                  2179 Male, age 61, both hemispheres 254.9
                                  Prepositus hypoglossal nucleus
                                  nTPM: 248.2
                                  2855 Female, age 85, right hemisphere 256.8
                                  2086 Male, age 80, both hemispheres 239.6
                                  Spinal trigeminal nucleus, caudal
                                  nTPM: 212.0
                                  2390 Female, age 91, both hemispheres 286.2
                                  2447 Male, age 76, both hemispheres 237.7
                                  2642 Male, age 74, both hemispheres 197.8
                                  2308 Male, age 80, both hemispheres 178.3
                                  2312 Male, age 61, both hemispheres 160.1
                                  Spinal trigeminal nucleus, interpolar
                                  nTPM: 275.7
                                  2066 Male, age 76, right hemisphere 353.1
                                  2625 Male, age 61, both hemispheres 327.0
                                  2033 Male, age 80, both hemispheres 267.9
                                  2386 Female, age 85, both hemispheres 231.7
                                  2389 Female, age 91, both hemispheres 198.9
                                  Spinal vestibular nucleus
                                  nTPM: 244.4
                                  2780 Male, age 80, both hemispheres 277.3
                                  2186 Female, age 91, both hemispheres 268.4
                                  2806 Female, age 85, both hemispheres 243.0
                                  2748 Male, age 76, both hemispheres 240.8
                                  2384 Male, age 74, both hemispheres 219.8
                                  2796 Male, age 61, both hemispheres 216.7
                                  Superior vestibular nucleus
                                  nTPM: 249.5
                                  2383 Male, age 74, both hemispheres 257.3
                                  2061 Male, age 76, both hemispheres 245.8
                                  2015 Male, age 80, both hemispheres 245.5
                                  Ventral medullary reticular nucleus
                                  nTPM: 202.4
                                  2060 Male, age 76, both hemispheres 224.3
                                  2372 Male, age 61, both hemispheres 180.4
                                  Ventrolateral medulla, A1-C1 cell groups
                                  nTPM: 237.2
                                  2741 Female, age 85, both hemispheres 283.7
                                  1986 Male, age 76, both hemispheres 281.0
                                  2180 Male, age 61, both hemispheres 226.5
                                  2302 Female, age 91, both hemispheres 223.3
                                  2118 Male, age 80, both hemispheres 171.4

                                  MEDULLA OBLONGATA - FANTOM5 CAGEi

                                  RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                  Max Scaled Tags Per Million 57.3
                                  FANTOM5 sample id Sample description Scaled Tags Per Million
                                  Medulla oblongata
                                  Scaled Tags Per Million: 57.3
                                  FF:10038-101F2 18-64 years, mixed 76.9
                                  FF:10174-103C3 60 years, female 49.5
                                  FF:10155-103A2 76 years, female 45.6

                                  MEDULLA OBLONGATA - Allen Mouse ISHi

                                  In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

                                  Max Expression energy 19.4
                                  Allen experiment id Experiment description Expression energy
                                  Medulla oblongata
                                  Expression energy: 19.4
                                  513469 Antisense, RP_040810_01_F11, Mouse strain C57BL/6J (56 days, male) 19.4

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