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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
185.8
nTPM
Monaco:
190.7
nTPM
Schmiedel:
314.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
185.8
HPA sample
nTPM
gdT-cell nTPM: 69.7
Samples: 6
Max nTPM: 93.8
Min nTPM: 45.1
P10809_1007
57.6
P10809_1022
60.5
P10809_1041
45.1
P10809_1060
93.8
P10809_1077
88.8
P10809_1098
72.5
MAIT T-cell nTPM: 129.7
Samples: 6
Max nTPM: 173.8
Min nTPM: 69.2
P10809_1006
130.2
P10809_1024
129.2
P10809_1043
69.2
P10809_1062
173.8
P10809_1083
143.3
P10809_1097
132.4
Memory CD4 T-cell nTPM: 129.8
Samples: 6
Max nTPM: 155.2
Min nTPM: 84.0
P10809_1014
152.6
P10809_1026
108.3
P10809_1045
84.0
P10809_1064
137.5
P10809_1086
155.2
P10809_1113
141.0
Memory CD8 T-cell nTPM: 91.6
Samples: 5
Max nTPM: 122.9
Min nTPM: 55.0
P10809_1012
100.6
P10809_1027
66.8
P10809_1046
55.0
P10809_1065
112.5
P10809_1111
122.9
Naive CD4 T-cell nTPM: 185.8
Samples: 6
Max nTPM: 235.5
Min nTPM: 147.4
P10809_1015
205.2
P10809_1030
151.7
P10809_1049
147.4
P10809_1068
235.5
P10809_1085
185.2
P10809_1112
189.7
Naive CD8 T-cell nTPM: 137.0
Samples: 6
Max nTPM: 173.2
Min nTPM: 80.9
P10809_1016
169.0
P10809_1031
138.3
P10809_1050
80.9
P10809_1069
159.7
P10809_1087
100.7
P10809_1110
173.2
T-reg nTPM: 101.0
Samples: 6
Max nTPM: 139.8
Min nTPM: 80.4
P10809_1018
80.4
P10809_1037
94.6
P10809_1056
86.0
P10809_1075
139.8
P10809_1094
100.7
P10809_1106
104.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
190.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 107.0
Samples: 4
Max nTPM: 128.4
Min nTPM: 88.5
RHH5202_R3573
119.2
RHH5230_R3602
128.4
RHH5259_R3631
88.5
RHH5288_R3660
91.7
Effector memory CD8 T-cell nTPM: 102.8
Samples: 4
Max nTPM: 125.9
Min nTPM: 72.5
RHH5203_R3574
72.5
RHH5231_R3603
125.9
RHH5260_R3632
97.1
RHH5289_R3661
115.5
MAIT T-cell nTPM: 103.1
Samples: 4
Max nTPM: 125.3
Min nTPM: 93.2
RHH5233_R3605
97.6
RHH5205_R3576
125.3
RHH5262_R3634
93.2
RHH5297_R3663
96.2
Memory CD4 T-cell TFH nTPM: 114.8
Samples: 4
Max nTPM: 168.6
Min nTPM: 81.3
RHH5300_R3666
81.3
RHH5236_R3608
168.6
RHH5265_R3637
112.2
RHH5208_R3579
97.2
Memory CD4 T-cell Th1 nTPM: 113.2
Samples: 4
Max nTPM: 130.6
Min nTPM: 81.8
RHH5210_R3581
130.6
RHH5302_R3668
123.5
RHH5238_R3610
81.8
RHH5267_R3639
116.9
Memory CD4 T-cell Th1/Th17 nTPM: 130.2
Samples: 4
Max nTPM: 147.3
Min nTPM: 110.7
RHH5303_R3669
133.8
RHH5211_R3582
147.3
RHH5239_R3611
110.7
RHH5268_R3640
129.1
Memory CD4 T-cell Th17 nTPM: 157.1
Samples: 4
Max nTPM: 223.5
Min nTPM: 107.2
RHH5304_R3670
115.9
RHH5212_R3583
181.7
RHH5240_R3612
223.5
RHH5269_R3641
107.2
Memory CD4 T-cell Th2 nTPM: 115.7
Samples: 4
Max nTPM: 123.6
Min nTPM: 107.1
RHH5305_R3671
117.0
RHH5213_R3584
123.6
RHH5241_R3613
114.9
RHH5270_R3642
107.1
Naive CD4 T-cell nTPM: 154.3
Samples: 4
Max nTPM: 230.1
Min nTPM: 118.4
RHH5306_R3672
127.9
RHH5214_R3585
230.1
RHH5242_R3614
118.4
RHH5271_R3643
140.7
Naive CD8 T-cell nTPM: 190.7
Samples: 4
Max nTPM: 208.6
Min nTPM: 166.3
RHH5201_R3572
208.6
RHH5229_R3601
187.6
RHH5258_R3630
200.2
RHH5287_R3659
166.3
Non-Vd2 gdTCR nTPM: 72.0
Samples: 4
Max nTPM: 85.3
Min nTPM: 47.2
RHH5235_R3607
82.6
RHH5264_R3636
85.3
RHH5207_R3578
72.9
RHH5299_R3665
47.2
T-reg nTPM: 124.9
Samples: 4
Max nTPM: 183.1
Min nTPM: 92.0
RHH5301_R3667
92.0
RHH5237_R3609
183.1
RHH5266_R3638
95.9
RHH5209_R3580
128.7
Terminal effector memory CD4 T-cell nTPM: 70.3
Samples: 2
Max nTPM: 92.9
Min nTPM: 47.6
RHH5243_R3615
47.6
RHH5272_R3644
92.9
Terminal effector memory CD8 T-cell nTPM: 69.4
Samples: 4
Max nTPM: 100.4
Min nTPM: 52.5
RHH5232_R3604
69.7
RHH5204_R3575
52.5
RHH5261_R3633
100.4
RHH5296_R3662
54.9
Vd2 gdTCR nTPM: 93.6
Samples: 4
Max nTPM: 107.1
Min nTPM: 77.3
RHH5234_R3606
95.2
RHH5206_R3577
77.3
RHH5263_R3635
107.1
RHH5298_R3664
94.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
