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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
93.1
nTPM
GTEx:
93.1
nTPM
FANTOM5:
28.1
Scaled Tags Per Million
Pig:
27.2
nTPM
Mouse:
42.7
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
93.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 93.1
Samples: 105
Max nTPM: 150.8
Min nTPM: 39.5
Std nTPM: 17.5
Median nTPM: 0.0
375_1
74 years, female
150.8
177_1
74 years, male
133.7
350_1
84 years, female
125.4
396_1
62 years, male
124.6
173_1
67 years, male
123.6
347_1
72 years, male
120.6
384_1
83 years, male
120.4
386_1
76 years, male
118.8
379_1
60 years, male
118.2
4_1
88 years, female
117.5
292_1
71 years, male
114.4
237_1
82 years, male
112.9
377_1
82 years, female
112.5
318_1
68 years, male
112.3
319_1
81 years, male
111.7
406_1
79 years, male
111.7
414_1
84 years, female
110.8
316_1
62 years, male
109.8
163_1
78 years, male
107.8
351_1
91 years, male
106.6
425_1
59 years, female
106.3
189_1
76 years, male
105.8
313_1
79 years, female
103.0
109_1
81 years, female
102.9
286_1
68 years, female
102.8
405_1
91 years, male
102.2
264_1
73 years, female
102.1
349_1
83 years, male
102.1
120_1
70 years, female
101.9
506_1
65 years, male
101.9
295_1
61 years, female
101.5
266_1
85 years, male
101.3
404_1
82 years, female
101.2
501_1
88 years, male
100.1
265_1
87 years, male
99.5
99_1
64 years, male
99.1
335_1
73 years, female
98.6
413_1
59 years, female
98.6
324_1
76 years, male
98.4
243_1
75 years, male
98.0
229_1
69 years, female
97.7
447_1
81 years, male
97.1
356_1
87 years, female
97.0
320_1
89 years, female
96.8
452_1
88 years, female
96.8
480_1
63 years, male
96.4
317_1
60 years, male
95.8
315_1
62 years, female
95.3
139_1
64 years, female
94.9
348_1
84 years, male
94.0
394_1
75 years, female
93.9
352_1
62 years, male
92.8
376_1
75 years, female
92.8
468_1
89 years, male
92.2
35_1
74 years, female
91.8
353_1
82 years, female
91.1
526_1
61 years, male
91.1
517_1
88 years, male
91.0
251_1
78 years, male
90.9
503_1
68 years, male
90.2
6_1
73 years, female
89.7
2_1
77 years, female
89.6
42_1
85 years, male
89.6
145_1
84 years, male
89.3
153_1
70 years, female
88.1
254_1
77 years, female
87.9
172_1
72 years, female
87.7
314_1
67 years, male
87.2
218_1
71 years, female
86.7
518_1
75 years, female
86.5
389_1
86 years, female
86.4
17_1
71 years, male
86.0
322_1
76 years, male
86.0
354_1
81 years, female
85.8
246_1
77 years, male
84.9
18_1
88 years, male
84.1
41_1
94 years, female
84.0
321_1
62 years, female
83.9
115_1
83 years, male
83.7
355_1
70 years, female
82.6
291_1
76 years, male
81.7
119_1
70 years, female
81.5
137_1
83 years, male
81.5
9_1
66 years, female
80.3
415_1
77 years, female
79.6
117_1
61 years, male
79.4
162_1
79 years, female
79.2
293_1
68 years, female
78.9
142_1
61 years, female
77.9
311_1
78 years, male
77.6
466_1
57 years, female
77.0
43_1
64 years, female
75.3
499_1
55 years, female
74.8
217_1
76 years, male
74.6
126_1
63 years, male
74.4
32_1
67 years, male
70.9
288_1
66 years, female
70.4
81_1
67 years, male
69.7
89_1
63 years, male
69.5
490_1
67 years, female
64.8
307_1
66 years, female
62.6
149_1
88 years, male
59.7
308_1
70 years, female
52.9
491_1
89 years, female
45.3
495_1
57 years, female
39.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
