HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:53.6 nTPM
HPA Brain:60.3 nTPM
GTEx:53.6 nTPM
FANTOM5:97.2 Scaled Tags Per Million
Pig:70.4 nTPM
Mouse:86.0 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035734
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.3
Sample id Sample description nTPM
Hippocampus
nTPM: 52.2
2621 Female, age 67, right hemisphere 59.7
2529 Female, age 94, left hemisphere 58.0
1898 Male, age 80, left hemisphere 55.1
1855 Male, age 76, left hemisphere 47.5
1911 Female, age 85, right hemisphere 47.2
2148 Female, age 91, left hemisphere 46.0
Dentate gyrus
nTPM: 51.3
2530 Female, age 94, left hemisphere 63.6
2010 Male, age 76, both hemispheres 53.4
2531 Female, age 67, both hemispheres 49.9
2246 Female, age 85, both hemispheres 48.7
1927 Female, age 91, both hemispheres 46.9
2528 Male, age 74, both hemispheres 45.6
Entorhinal gyrus
nTPM: 59.4
2764 Male, age 80, right hemisphere 69.2
2117 Female, age 91, right hemisphere 60.0
1938 Female, age 85, left hemisphere 59.4
1787 Male, age 76, left hemisphere 57.6
2613 Female, age 94, left hemisphere 56.9
2686 Male, age 75, right hemisphere 53.5
Hippocampus, CA1
nTPM: 48.3
2749 Male, age 80, left hemisphere 54.5
1873 Female, age 85, both hemispheres 48.9
2082 Female, age 91, right hemisphere 48.4
2527 Male, age 74, both hemispheres 48.4
2045 Male, age 76, both hemispheres 41.5
Hippocampus, CA2
nTPM: 53.4
1940 Female, age 85, left hemisphere 59.8
1963 Male, age 80, left hemisphere 57.4
2249 Male, age 74, both hemispheres 55.2
2437 Female, age 94, left hemisphere 53.1
1892 Male, age 76, both hemispheres 47.7
2113 Female, age 91, right hemisphere 47.0
Hippocampus, CA3
nTPM: 60.3
2436 Male, age 74, both hemispheres 99.3
2861 Female, age 67, both hemispheres 60.0
1891 Female, age 85, both hemispheres 55.0
1867 Male, age 76, both hemispheres 49.8
2137 Male, age 80, left hemisphere 49.5
2620 Female, age 94, left hemisphere 48.4
Parahippocampal cortex
nTPM: 57.8
2532 Female, age 72, left hemisphere 66.3
1850 Male, age 80, both hemispheres 61.3
2018 Male, age 76, both hemispheres 59.9
2245 Female, age 91, both hemispheres 58.4
2692 Male, age 74, both hemispheres 57.9
1990 Female, age 91, right hemisphere 57.8
1933 Female, age 85, both hemispheres 57.4
2622 Female, age 67, right hemisphere 54.5
2250 Female, age 67, right hemisphere 52.5
2693 Female, age 94, both hemispheres 52.1
Perirhinal gyrus
nTPM: 57.0
1847 Female, age 91, left hemisphere 61.1
1794 Male, age 80, right hemisphere 60.8
1841 Female, age 85, right hemisphere 58.6
2848 Male, age 76, right hemisphere 57.7
2521 Female, age 94, right hemisphere 47.0
Subiculum
nTPM: 58.5
2042 Male, age 76, both hemispheres 66.1
2438 Female, age 94, left hemisphere 65.3
1901 Male, age 80, both hemispheres 59.5
1977 Female, age 85, both hemispheres 59.3
2619 Male, age 74, both hemispheres 55.9
2729 Female, age 91, right hemisphere 44.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.6
Samples: 197

Max nTPM: 132.2
Min nTPM: 35.2
Std nTPM: 11.9
Median nTPM: 51.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 132.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 90.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 89.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 83.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 82.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 79.0
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 78.9
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 76.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 76.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 75.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 74.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.2
FF:10153-102I9 76 years, female 108.3
FF:10169-103B7 60 years, female 86.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.4
Pig sample Sample description nTPM
Subiculum
nTPM: 66.0
Samples: 4

Max nTPM: 69.5
Min nTPM: 60.1
Sample A Female 69.5
Sample B Female 66.1
Sample C Male 68.2
Sample D Male 60.1
Dorsal hippocampus
nTPM: 63.6
Samples: 4

Max nTPM: 76.1
Min nTPM: 43.0
Sample A Female 69.0
Sample B Female 66.4
Sample C Male 76.1
Sample D Male 43.0
Entorhinal cortex
nTPM: 58.7
Samples: 4

Max nTPM: 61.4
Min nTPM: 55.9
Sample A Female 57.9
Sample B Female 59.5
Sample C Male 61.4
Sample D Male 55.9
Ventral hippocampus
nTPM: 70.4
Samples: 4

Max nTPM: 91.8
Min nTPM: 54.5
Sample A Female 63.0
Sample B Female 54.5
Sample C Male 91.8
Sample D Male 72.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 86.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.9
Samples: 4

Max nTPM: 89.7
Min nTPM: 76.5
Sample A Male 76.5
Sample B Male 79.6
Sample C Female 89.7
Sample D Female 89.7
Hippocampal formation
nTPM: 86.0
Samples: 4

Max nTPM: 91.4
Min nTPM: 79.4
Sample A Male 79.4
Sample B Male 83.7
Sample C Female 91.4
Sample D Female 89.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
69529280 Antisense, RP_050421_03_H07, Mouse strain C57BL/6J (56 days, male) 6.6

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