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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
40.0
nTPM
Monaco:
106.8
nTPM
Schmiedel:
256.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.0
HPA sample
nTPM
gdT-cell nTPM: 40.0
Samples: 6
Max nTPM: 49.2
Min nTPM: 29.2
P10809_1007
44.8
P10809_1022
43.3
P10809_1041
36.3
P10809_1060
29.2
P10809_1077
37.2
P10809_1098
49.2
MAIT T-cell nTPM: 31.0
Samples: 6
Max nTPM: 38.0
Min nTPM: 25.3
P10809_1006
35.5
P10809_1024
33.4
P10809_1043
25.3
P10809_1062
27.2
P10809_1083
26.5
P10809_1097
38.0
Memory CD4 T-cell nTPM: 17.2
Samples: 6
Max nTPM: 24.8
Min nTPM: 13.1
P10809_1014
16.1
P10809_1026
14.4
P10809_1045
13.1
P10809_1064
18.6
P10809_1086
24.8
P10809_1113
16.1
Memory CD8 T-cell nTPM: 26.8
Samples: 5
Max nTPM: 34.9
Min nTPM: 16.5
P10809_1012
29.1
P10809_1027
16.5
P10809_1046
34.9
P10809_1065
27.0
P10809_1111
26.3
Naive CD4 T-cell nTPM: 7.7
Samples: 6
Max nTPM: 12.3
Min nTPM: 5.0
P10809_1015
8.4
P10809_1030
5.0
P10809_1049
5.0
P10809_1068
6.3
P10809_1085
12.3
P10809_1112
9.4
Naive CD8 T-cell nTPM: 18.7
Samples: 6
Max nTPM: 30.0
Min nTPM: 8.9
P10809_1016
8.9
P10809_1031
19.6
P10809_1050
22.1
P10809_1069
21.3
P10809_1087
30.0
P10809_1110
10.0
T-reg nTPM: 21.9
Samples: 6
Max nTPM: 29.0
Min nTPM: 9.8
P10809_1018
29.0
P10809_1037
22.8
P10809_1056
20.0
P10809_1075
9.8
P10809_1094
24.3
P10809_1106
25.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
106.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 40.8
Samples: 4
Max nTPM: 47.4
Min nTPM: 32.2
RHH5202_R3573
37.9
RHH5230_R3602
45.8
RHH5259_R3631
47.4
RHH5288_R3660
32.2
Effector memory CD8 T-cell nTPM: 82.6
Samples: 4
Max nTPM: 90.4
Min nTPM: 76.4
RHH5203_R3574
76.4
RHH5231_R3603
85.4
RHH5260_R3632
78.0
RHH5289_R3661
90.4
MAIT T-cell nTPM: 86.6
Samples: 4
Max nTPM: 106.5
Min nTPM: 61.7
RHH5233_R3605
61.7
RHH5205_R3576
103.1
RHH5262_R3634
106.5
RHH5297_R3663
75.2
Memory CD4 T-cell TFH nTPM: 30.3
Samples: 4
Max nTPM: 34.4
Min nTPM: 26.4
RHH5300_R3666
33.6
RHH5236_R3608
26.4
RHH5265_R3637
34.4
RHH5208_R3579
26.9
Memory CD4 T-cell Th1 nTPM: 34.1
Samples: 4
Max nTPM: 41.1
Min nTPM: 30.2
RHH5210_R3581
30.2
RHH5302_R3668
34.6
RHH5238_R3610
30.4
RHH5267_R3639
41.1
Memory CD4 T-cell Th1/Th17 nTPM: 46.7
Samples: 4
Max nTPM: 51.2
Min nTPM: 44.2
RHH5303_R3669
51.2
RHH5211_R3582
44.2
RHH5239_R3611
46.6
RHH5268_R3640
44.6
Memory CD4 T-cell Th17 nTPM: 48.9
Samples: 4
Max nTPM: 62.9
Min nTPM: 42.8
RHH5304_R3670
44.0
RHH5212_R3583
42.8
RHH5240_R3612
45.8
RHH5269_R3641
62.9
Memory CD4 T-cell Th2 nTPM: 31.7
Samples: 4
Max nTPM: 39.2
Min nTPM: 28.3
RHH5305_R3671
28.6
RHH5213_R3584
30.8
RHH5241_R3613
28.3
RHH5270_R3642
39.2
Naive CD4 T-cell nTPM: 19.0
Samples: 4
Max nTPM: 25.8
Min nTPM: 15.3
RHH5306_R3672
15.3
RHH5214_R3585
19.5
RHH5242_R3614
25.8
RHH5271_R3643
15.5
Naive CD8 T-cell nTPM: 18.1
Samples: 4
Max nTPM: 24.7
Min nTPM: 13.7
RHH5201_R3572
24.7
RHH5229_R3601
17.1
RHH5258_R3630
16.7
RHH5287_R3659
13.7
Non-Vd2 gdTCR nTPM: 106.8
Samples: 4
Max nTPM: 131.0
Min nTPM: 90.1
RHH5235_R3607
110.1
RHH5264_R3636
95.9
RHH5207_R3578
131.0
RHH5299_R3665
90.1
T-reg nTPM: 31.5
Samples: 4
Max nTPM: 39.7
Min nTPM: 25.1
RHH5301_R3667
25.1
RHH5237_R3609
27.7
RHH5266_R3638
39.7
RHH5209_R3580
33.3
Terminal effector memory CD4 T-cell nTPM: 100.9
Samples: 2
Max nTPM: 124.9
Min nTPM: 76.9
RHH5243_R3615
124.9
RHH5272_R3644
76.9
Terminal effector memory CD8 T-cell nTPM: 96.4
Samples: 4
Max nTPM: 102.8
Min nTPM: 91.4
RHH5232_R3604
98.7
RHH5204_R3575
92.8
RHH5261_R3633
91.4
RHH5296_R3662
102.8
Vd2 gdTCR nTPM: 72.1
Samples: 4
Max nTPM: 82.4
Min nTPM: 63.6
RHH5234_R3606
65.2
RHH5206_R3577
82.4
RHH5263_R3635
63.6
RHH5298_R3664
77.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
