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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
25.6
nTPM
Monaco:
213.3
nTPM
Schmiedel:
367.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.6
HPA sample
nTPM
gdT-cell nTPM: 23.1
Samples: 6
Max nTPM: 31.1
Min nTPM: 14.1
P10809_1007
28.8
P10809_1022
16.7
P10809_1041
31.1
P10809_1060
28.3
P10809_1077
14.1
P10809_1098
19.5
MAIT T-cell nTPM: 23.4
Samples: 6
Max nTPM: 47.3
Min nTPM: 11.2
P10809_1006
47.3
P10809_1024
18.4
P10809_1043
27.3
P10809_1062
18.7
P10809_1083
11.2
P10809_1097
17.5
Memory CD4 T-cell nTPM: 17.6
Samples: 6
Max nTPM: 32.9
Min nTPM: 9.3
P10809_1014
32.9
P10809_1026
10.6
P10809_1045
16.7
P10809_1064
17.5
P10809_1086
9.3
P10809_1113
18.5
Memory CD8 T-cell nTPM: 21.3
Samples: 5
Max nTPM: 37.5
Min nTPM: 14.5
P10809_1012
37.5
P10809_1027
16.4
P10809_1046
15.3
P10809_1065
14.5
P10809_1111
22.9
Naive CD4 T-cell nTPM: 22.6
Samples: 6
Max nTPM: 39.7
Min nTPM: 7.6
P10809_1015
39.7
P10809_1030
14.2
P10809_1049
7.6
P10809_1068
30.3
P10809_1085
15.4
P10809_1112
28.5
Naive CD8 T-cell nTPM: 25.6
Samples: 6
Max nTPM: 55.7
Min nTPM: 13.3
P10809_1016
55.7
P10809_1031
17.8
P10809_1050
22.6
P10809_1069
22.8
P10809_1087
13.3
P10809_1110
21.3
T-reg nTPM: 13.9
Samples: 6
Max nTPM: 30.2
Min nTPM: 3.1
P10809_1018
30.2
P10809_1037
8.5
P10809_1056
3.1
P10809_1075
12.6
P10809_1094
16.4
P10809_1106
12.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
213.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 147.2
Samples: 4
Max nTPM: 166.8
Min nTPM: 135.1
RHH5202_R3573
141.4
RHH5230_R3602
145.5
RHH5259_R3631
166.8
RHH5288_R3660
135.1
Effector memory CD8 T-cell nTPM: 128.7
Samples: 4
Max nTPM: 149.7
Min nTPM: 120.4
RHH5203_R3574
122.9
RHH5231_R3603
121.6
RHH5260_R3632
149.7
RHH5289_R3661
120.4
MAIT T-cell nTPM: 126.5
Samples: 4
Max nTPM: 148.8
Min nTPM: 105.3
RHH5233_R3605
148.8
RHH5205_R3576
140.2
RHH5262_R3634
105.3
RHH5297_R3663
111.6
Memory CD4 T-cell TFH nTPM: 137.8
Samples: 4
Max nTPM: 147.0
Min nTPM: 126.5
RHH5300_R3666
135.4
RHH5236_R3608
142.3
RHH5265_R3637
126.5
RHH5208_R3579
147.0
Memory CD4 T-cell Th1 nTPM: 161.1
Samples: 4
Max nTPM: 199.9
Min nTPM: 134.4
RHH5210_R3581
174.1
RHH5302_R3668
136.0
RHH5238_R3610
199.9
RHH5267_R3639
134.4
Memory CD4 T-cell Th1/Th17 nTPM: 134.2
Samples: 4
Max nTPM: 175.2
Min nTPM: 97.7
RHH5303_R3669
97.7
RHH5211_R3582
149.2
RHH5239_R3611
175.2
RHH5268_R3640
114.6
Memory CD4 T-cell Th17 nTPM: 143.9
Samples: 4
Max nTPM: 169.2
Min nTPM: 120.6
RHH5304_R3670
120.6
RHH5212_R3583
132.7
RHH5240_R3612
169.2
RHH5269_R3641
153.1
Memory CD4 T-cell Th2 nTPM: 142.2
Samples: 4
Max nTPM: 156.2
Min nTPM: 118.4
RHH5305_R3671
139.7
RHH5213_R3584
154.5
RHH5241_R3613
118.4
RHH5270_R3642
156.2
Naive CD4 T-cell nTPM: 178.6
Samples: 4
Max nTPM: 216.8
Min nTPM: 152.9
RHH5306_R3672
162.9
RHH5214_R3585
152.9
RHH5242_R3614
181.9
RHH5271_R3643
216.8
Naive CD8 T-cell nTPM: 213.3
Samples: 4
Max nTPM: 314.5
Min nTPM: 152.6
RHH5201_R3572
168.6
RHH5229_R3601
314.5
RHH5258_R3630
152.6
RHH5287_R3659
217.3
Non-Vd2 gdTCR nTPM: 113.6
Samples: 4
Max nTPM: 122.9
Min nTPM: 107.9
RHH5235_R3607
113.7
RHH5264_R3636
109.8
RHH5207_R3578
122.9
RHH5299_R3665
107.9
T-reg nTPM: 130.1
Samples: 4
Max nTPM: 160.1
Min nTPM: 106.5
RHH5301_R3667
106.5
RHH5237_R3609
129.7
RHH5266_R3638
124.0
RHH5209_R3580
160.1
Terminal effector memory CD4 T-cell nTPM: 141.2
Samples: 2
Max nTPM: 145.7
Min nTPM: 136.6
RHH5243_R3615
136.6
RHH5272_R3644
145.7
Terminal effector memory CD8 T-cell nTPM: 130.6
Samples: 4
Max nTPM: 148.2
Min nTPM: 103.4
RHH5232_R3604
148.2
RHH5204_R3575
103.4
RHH5261_R3633
128.0
RHH5296_R3662
142.8
Vd2 gdTCR nTPM: 106.2
Samples: 4
Max nTPM: 137.5
Min nTPM: 94.1
RHH5234_R3606
94.1
RHH5206_R3577
97.2
RHH5263_R3635
137.5
RHH5298_R3664
96.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
