HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:24.2 nTPM
HPA Brain:86.9 nTPM
GTEx:24.2 nTPM
FANTOM5:52.6 Scaled Tags Per Million
Pig:33.4 nTPM
Mouse:21.3 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029069
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 86.9
Sample id Sample description nTPM
Hippocampus
nTPM: 86.9
2529 Female, age 94, left hemisphere 98.6
2621 Female, age 67, right hemisphere 97.2
2148 Female, age 91, left hemisphere 92.9
1911 Female, age 85, right hemisphere 81.9
1855 Male, age 76, left hemisphere 80.1
1898 Male, age 80, left hemisphere 71.0
Dentate gyrus
nTPM: 84.0
2530 Female, age 94, left hemisphere 112.1
2531 Female, age 67, both hemispheres 95.0
2246 Female, age 85, both hemispheres 85.7
1927 Female, age 91, both hemispheres 77.1
2010 Male, age 76, both hemispheres 69.6
2528 Male, age 74, both hemispheres 64.3
Entorhinal gyrus
nTPM: 86.3
2686 Male, age 75, right hemisphere 107.5
2613 Female, age 94, left hemisphere 89.7
2117 Female, age 91, right hemisphere 87.3
1938 Female, age 85, left hemisphere 82.4
2764 Male, age 80, right hemisphere 75.7
1787 Male, age 76, left hemisphere 75.0
Hippocampus, CA1
nTPM: 75.3
2045 Male, age 76, both hemispheres 88.0
1873 Female, age 85, both hemispheres 82.8
2527 Male, age 74, both hemispheres 74.0
2082 Female, age 91, right hemisphere 68.5
2749 Male, age 80, left hemisphere 63.3
Hippocampus, CA2
nTPM: 74.0
2437 Female, age 94, left hemisphere 81.9
1963 Male, age 80, left hemisphere 81.4
2113 Female, age 91, right hemisphere 74.2
1940 Female, age 85, left hemisphere 72.6
1892 Male, age 76, both hemispheres 71.6
2249 Male, age 74, both hemispheres 62.1
Hippocampus, CA3
nTPM: 79.0
2861 Female, age 67, both hemispheres 97.4
2620 Female, age 94, left hemisphere 91.1
1891 Female, age 85, both hemispheres 83.8
1867 Male, age 76, both hemispheres 71.2
2137 Male, age 80, left hemisphere 70.7
2436 Male, age 74, both hemispheres 59.5
Parahippocampal cortex
nTPM: 79.8
2692 Male, age 74, both hemispheres 95.3
2622 Female, age 67, right hemisphere 91.8
2245 Female, age 91, both hemispheres 88.0
2532 Female, age 72, left hemisphere 86.5
1850 Male, age 80, both hemispheres 81.3
1933 Female, age 85, both hemispheres 76.2
2018 Male, age 76, both hemispheres 73.2
1990 Female, age 91, right hemisphere 73.1
2693 Female, age 94, both hemispheres 66.8
2250 Female, age 67, right hemisphere 66.3
Perirhinal gyrus
nTPM: 72.8
2848 Male, age 76, right hemisphere 86.9
1841 Female, age 85, right hemisphere 73.2
1794 Male, age 80, right hemisphere 72.4
1847 Female, age 91, left hemisphere 68.4
2521 Female, age 94, right hemisphere 62.9
Subiculum
nTPM: 84.2
2438 Female, age 94, left hemisphere 117.4
2619 Male, age 74, both hemispheres 82.7
2042 Male, age 76, both hemispheres 81.6
1977 Female, age 85, both hemispheres 76.5
1901 Male, age 80, both hemispheres 75.5
2729 Female, age 91, right hemisphere 71.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.2
Samples: 197

Max nTPM: 46.8
Min nTPM: 8.3
Std nTPM: 5.5
Median nTPM: 23.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 46.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 43.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 40.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 40.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 38.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 38.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 38.2
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 37.6
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 37.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 36.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 35.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.6
FF:10153-102I9 76 years, female 65.8
FF:10169-103B7 60 years, female 39.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.4
Pig sample Sample description nTPM
Subiculum
nTPM: 33.5
Samples: 4

Max nTPM: 38.5
Min nTPM: 31.1
Sample A Female 38.5
Sample B Female 31.2
Sample C Male 33.1
Sample D Male 31.1
Dorsal hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 36.4
Min nTPM: 31.8
Sample A Female 31.9
Sample B Female 33.6
Sample C Male 36.4
Sample D Male 31.8
Entorhinal cortex
nTPM: 31.3
Samples: 4

Max nTPM: 34.8
Min nTPM: 28.4
Sample A Female 34.8
Sample B Female 28.4
Sample C Male 29.8
Sample D Male 32.0
Ventral hippocampus
nTPM: 32.8
Samples: 4

Max nTPM: 36.7
Min nTPM: 30.0
Sample A Female 30.0
Sample B Female 30.9
Sample C Male 33.4
Sample D Male 36.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 22.8
Min nTPM: 19.5
Sample A Male 22.3
Sample B Male 20.6
Sample C Female 19.5
Sample D Female 22.8
Hippocampal formation
nTPM: 20.2
Samples: 4

Max nTPM: 25.7
Min nTPM: 15.8
Sample A Male 15.8
Sample B Male 25.7
Sample C Female 22.2
Sample D Female 17.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
68844701 Antisense, RP_050222_02_C03, Mouse strain C57BL/6J (56 days, male) 9.5

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