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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
18.5
nTPM
Monaco:
377.9
nTPM
Schmiedel:
139.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.5
HPA sample
nTPM
gdT-cell nTPM: 15.6
Samples: 6
Max nTPM: 21.1
Min nTPM: 7.3
P10809_1007
20.9
P10809_1022
13.2
P10809_1041
15.8
P10809_1060
15.2
P10809_1077
21.1
P10809_1098
7.3
MAIT T-cell nTPM: 16.5
Samples: 6
Max nTPM: 27.5
Min nTPM: 5.8
P10809_1006
27.5
P10809_1024
23.1
P10809_1043
8.6
P10809_1062
21.3
P10809_1083
12.6
P10809_1097
5.8
Memory CD4 T-cell nTPM: 13.2
Samples: 6
Max nTPM: 19.6
Min nTPM: 8.6
P10809_1014
14.8
P10809_1026
8.6
P10809_1045
11.2
P10809_1064
19.6
P10809_1086
14.6
P10809_1113
10.1
Memory CD8 T-cell nTPM: 15.6
Samples: 5
Max nTPM: 22.6
Min nTPM: 12.5
P10809_1012
22.6
P10809_1027
13.2
P10809_1046
12.5
P10809_1065
17.1
P10809_1111
12.7
Naive CD4 T-cell nTPM: 10.7
Samples: 6
Max nTPM: 17.6
Min nTPM: 6.3
P10809_1015
17.6
P10809_1030
9.2
P10809_1049
6.3
P10809_1068
14.2
P10809_1085
9.8
P10809_1112
7.2
Naive CD8 T-cell nTPM: 15.0
Samples: 6
Max nTPM: 19.8
Min nTPM: 6.1
P10809_1016
15.1
P10809_1031
19.8
P10809_1050
13.7
P10809_1069
19.8
P10809_1087
15.6
P10809_1110
6.1
T-reg nTPM: 18.5
Samples: 6
Max nTPM: 26.3
Min nTPM: 12.5
P10809_1018
17.0
P10809_1037
26.3
P10809_1056
12.5
P10809_1075
19.4
P10809_1094
20.0
P10809_1106
15.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
377.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 321.6
Samples: 4
Max nTPM: 381.8
Min nTPM: 275.4
RHH5202_R3573
381.8
RHH5230_R3602
282.0
RHH5259_R3631
347.0
RHH5288_R3660
275.4
Effector memory CD8 T-cell nTPM: 281.6
Samples: 4
Max nTPM: 353.6
Min nTPM: 204.1
RHH5203_R3574
353.6
RHH5231_R3603
204.1
RHH5260_R3632
232.7
RHH5289_R3661
335.8
MAIT T-cell nTPM: 287.3
Samples: 4
Max nTPM: 363.3
Min nTPM: 195.4
RHH5233_R3605
348.4
RHH5205_R3576
363.3
RHH5262_R3634
242.1
RHH5297_R3663
195.4
Memory CD4 T-cell TFH nTPM: 296.6
Samples: 4
Max nTPM: 338.8
Min nTPM: 262.7
RHH5300_R3666
262.7
RHH5236_R3608
267.1
RHH5265_R3637
317.7
RHH5208_R3579
338.8
Memory CD4 T-cell Th1 nTPM: 285.8
Samples: 4
Max nTPM: 387.1
Min nTPM: 205.6
RHH5210_R3581
262.2
RHH5302_R3668
205.6
RHH5238_R3610
387.1
RHH5267_R3639
288.4
Memory CD4 T-cell Th1/Th17 nTPM: 297.0
Samples: 4
Max nTPM: 435.7
Min nTPM: 201.8
RHH5303_R3669
244.4
RHH5211_R3582
201.8
RHH5239_R3611
435.7
RHH5268_R3640
306.1
Memory CD4 T-cell Th17 nTPM: 282.5
Samples: 4
Max nTPM: 308.8
Min nTPM: 251.2
RHH5304_R3670
265.5
RHH5212_R3583
251.2
RHH5240_R3612
308.8
RHH5269_R3641
304.4
Memory CD4 T-cell Th2 nTPM: 233.9
Samples: 4
Max nTPM: 267.4
Min nTPM: 198.2
RHH5305_R3671
198.2
RHH5213_R3584
225.9
RHH5241_R3613
267.4
RHH5270_R3642
244.1
Naive CD4 T-cell nTPM: 234.1
Samples: 4
Max nTPM: 275.2
Min nTPM: 201.3
RHH5306_R3672
201.3
RHH5214_R3585
205.2
RHH5242_R3614
254.6
RHH5271_R3643
275.2
Naive CD8 T-cell nTPM: 210.3
Samples: 4
Max nTPM: 228.0
Min nTPM: 181.5
RHH5201_R3572
228.0
RHH5229_R3601
220.8
RHH5258_R3630
181.5
RHH5287_R3659
210.8
Non-Vd2 gdTCR nTPM: 251.6
Samples: 4
Max nTPM: 290.0
Min nTPM: 214.5
RHH5235_R3607
290.0
RHH5264_R3636
222.9
RHH5207_R3578
278.8
RHH5299_R3665
214.5
T-reg nTPM: 231.9
Samples: 4
Max nTPM: 272.7
Min nTPM: 201.7
RHH5301_R3667
201.7
RHH5237_R3609
219.9
RHH5266_R3638
233.4
RHH5209_R3580
272.7
Terminal effector memory CD4 T-cell nTPM: 377.9
Samples: 2
Max nTPM: 427.7
Min nTPM: 328.1
RHH5243_R3615
328.1
RHH5272_R3644
427.7
Terminal effector memory CD8 T-cell nTPM: 280.2
Samples: 4
Max nTPM: 346.2
Min nTPM: 223.6
RHH5232_R3604
346.2
RHH5204_R3575
295.2
RHH5261_R3633
223.6
RHH5296_R3662
255.8
Vd2 gdTCR nTPM: 226.3
Samples: 4
Max nTPM: 298.1
Min nTPM: 188.5
RHH5234_R3606
298.1
RHH5206_R3577
188.5
RHH5263_R3635
226.5
RHH5298_R3664
192.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
