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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
107.4
nTPM
Monaco:
203.7
nTPM
Schmiedel:
83.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.4
HPA sample
nTPM
gdT-cell nTPM: 96.8
Samples: 6
Max nTPM: 110.2
Min nTPM: 73.6
P10809_1007
99.7
P10809_1022
97.3
P10809_1041
104.0
P10809_1060
73.6
P10809_1077
96.1
P10809_1098
110.2
MAIT T-cell nTPM: 99.4
Samples: 6
Max nTPM: 117.7
Min nTPM: 85.0
P10809_1006
85.0
P10809_1024
92.3
P10809_1043
102.8
P10809_1062
88.6
P10809_1083
117.7
P10809_1097
110.0
Memory CD4 T-cell nTPM: 91.4
Samples: 6
Max nTPM: 118.0
Min nTPM: 83.4
P10809_1014
84.1
P10809_1026
118.0
P10809_1045
88.8
P10809_1064
84.5
P10809_1086
83.4
P10809_1113
89.3
Memory CD8 T-cell nTPM: 92.6
Samples: 5
Max nTPM: 114.5
Min nTPM: 73.5
P10809_1012
89.5
P10809_1027
91.1
P10809_1046
114.5
P10809_1065
73.5
P10809_1111
94.5
Naive CD4 T-cell nTPM: 62.6
Samples: 6
Max nTPM: 68.0
Min nTPM: 52.6
P10809_1015
52.6
P10809_1030
65.5
P10809_1049
65.4
P10809_1068
65.5
P10809_1085
58.5
P10809_1112
68.0
Naive CD8 T-cell nTPM: 65.1
Samples: 6
Max nTPM: 79.3
Min nTPM: 48.1
P10809_1016
54.6
P10809_1031
48.1
P10809_1050
72.0
P10809_1069
70.7
P10809_1087
79.3
P10809_1110
66.0
T-reg nTPM: 107.4
Samples: 6
Max nTPM: 120.9
Min nTPM: 82.5
P10809_1018
118.1
P10809_1037
87.9
P10809_1056
115.7
P10809_1075
82.5
P10809_1094
120.9
P10809_1106
119.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
203.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 145.3
Samples: 4
Max nTPM: 180.2
Min nTPM: 86.9
RHH5202_R3573
142.1
RHH5230_R3602
172.1
RHH5259_R3631
86.9
RHH5288_R3660
180.2
Effector memory CD8 T-cell nTPM: 181.3
Samples: 4
Max nTPM: 213.0
Min nTPM: 128.6
RHH5203_R3574
213.0
RHH5231_R3603
185.0
RHH5260_R3632
128.6
RHH5289_R3661
198.4
MAIT T-cell nTPM: 197.0
Samples: 4
Max nTPM: 215.2
Min nTPM: 174.3
RHH5233_R3605
193.0
RHH5205_R3576
174.3
RHH5262_R3634
215.2
RHH5297_R3663
205.5
Memory CD4 T-cell TFH nTPM: 153.1
Samples: 4
Max nTPM: 178.1
Min nTPM: 141.5
RHH5300_R3666
146.3
RHH5236_R3608
178.1
RHH5265_R3637
146.5
RHH5208_R3579
141.5
Memory CD4 T-cell Th1 nTPM: 139.2
Samples: 4
Max nTPM: 165.8
Min nTPM: 94.4
RHH5210_R3581
155.5
RHH5302_R3668
165.8
RHH5238_R3610
94.4
RHH5267_R3639
141.0
Memory CD4 T-cell Th1/Th17 nTPM: 172.1
Samples: 4
Max nTPM: 255.7
Min nTPM: 95.4
RHH5303_R3669
188.7
RHH5211_R3582
255.7
RHH5239_R3611
95.4
RHH5268_R3640
148.6
Memory CD4 T-cell Th17 nTPM: 154.4
Samples: 4
Max nTPM: 193.4
Min nTPM: 123.7
RHH5304_R3670
163.9
RHH5212_R3583
193.4
RHH5240_R3612
123.7
RHH5269_R3641
136.4
Memory CD4 T-cell Th2 nTPM: 203.7
Samples: 4
Max nTPM: 218.7
Min nTPM: 184.4
RHH5305_R3671
208.3
RHH5213_R3584
218.7
RHH5241_R3613
203.5
RHH5270_R3642
184.4
Naive CD4 T-cell nTPM: 111.3
Samples: 4
Max nTPM: 136.2
Min nTPM: 91.2
RHH5306_R3672
136.2
RHH5214_R3585
122.4
RHH5242_R3614
95.2
RHH5271_R3643
91.2
Naive CD8 T-cell nTPM: 92.8
Samples: 4
Max nTPM: 112.0
Min nTPM: 51.1
RHH5201_R3572
112.0
RHH5229_R3601
51.1
RHH5258_R3630
107.0
RHH5287_R3659
100.9
Non-Vd2 gdTCR nTPM: 189.3
Samples: 4
Max nTPM: 225.3
Min nTPM: 138.3
RHH5235_R3607
138.3
RHH5264_R3636
184.9
RHH5207_R3578
208.7
RHH5299_R3665
225.3
T-reg nTPM: 141.4
Samples: 4
Max nTPM: 166.9
Min nTPM: 116.8
RHH5301_R3667
166.9
RHH5237_R3609
159.8
RHH5266_R3638
116.8
RHH5209_R3580
122.2
Terminal effector memory CD4 T-cell nTPM: 153.7
Samples: 2
Max nTPM: 154.4
Min nTPM: 152.9
RHH5243_R3615
154.4
RHH5272_R3644
152.9
Terminal effector memory CD8 T-cell nTPM: 200.7
Samples: 4
Max nTPM: 232.8
Min nTPM: 158.1
RHH5232_R3604
232.8
RHH5204_R3575
210.8
RHH5261_R3633
158.1
RHH5296_R3662
200.9
Vd2 gdTCR nTPM: 182.6
Samples: 4
Max nTPM: 224.4
Min nTPM: 142.4
RHH5234_R3606
191.5
RHH5206_R3577
224.4
RHH5263_R3635
142.4
RHH5298_R3664
172.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
