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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
44.3
nTPM
Monaco:
22.8
nTPM
Schmiedel:
18.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.3
HPA sample
nTPM
gdT-cell nTPM: 25.8
Samples: 6
Max nTPM: 35.6
Min nTPM: 18.4
P10809_1007
18.4
P10809_1022
21.6
P10809_1041
35.6
P10809_1060
27.5
P10809_1077
31.2
P10809_1098
20.3
MAIT T-cell nTPM: 27.9
Samples: 6
Max nTPM: 35.1
Min nTPM: 15.7
P10809_1006
15.7
P10809_1024
29.2
P10809_1043
29.4
P10809_1062
25.9
P10809_1083
35.1
P10809_1097
31.9
Memory CD4 T-cell nTPM: 39.3
Samples: 6
Max nTPM: 44.3
Min nTPM: 36.1
P10809_1014
36.1
P10809_1026
42.0
P10809_1045
37.1
P10809_1064
36.3
P10809_1086
44.3
P10809_1113
39.9
Memory CD8 T-cell nTPM: 31.8
Samples: 5
Max nTPM: 37.4
Min nTPM: 26.6
P10809_1012
26.6
P10809_1027
29.1
P10809_1046
28.9
P10809_1065
37.4
P10809_1111
37.1
Naive CD4 T-cell nTPM: 32.0
Samples: 6
Max nTPM: 38.2
Min nTPM: 25.4
P10809_1015
25.4
P10809_1030
38.2
P10809_1049
38.0
P10809_1068
29.0
P10809_1085
34.0
P10809_1112
27.6
Naive CD8 T-cell nTPM: 28.0
Samples: 6
Max nTPM: 33.7
Min nTPM: 19.6
P10809_1016
19.6
P10809_1031
32.9
P10809_1050
29.3
P10809_1069
33.7
P10809_1087
28.4
P10809_1110
24.1
T-reg nTPM: 44.3
Samples: 6
Max nTPM: 61.4
Min nTPM: 25.8
P10809_1018
25.8
P10809_1037
45.6
P10809_1056
61.4
P10809_1075
54.7
P10809_1094
44.6
P10809_1106
33.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
22.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 13.9
Samples: 4
Max nTPM: 21.6
Min nTPM: 3.8
RHH5202_R3573
10.9
RHH5230_R3602
19.1
RHH5259_R3631
21.6
RHH5288_R3660
3.8
Effector memory CD8 T-cell nTPM: 11.7
Samples: 4
Max nTPM: 17.2
Min nTPM: 6.3
RHH5203_R3574
12.3
RHH5231_R3603
6.3
RHH5260_R3632
11.1
RHH5289_R3661
17.2
MAIT T-cell nTPM: 22.9
Samples: 4
Max nTPM: 29.3
Min nTPM: 16.8
RHH5233_R3605
19.6
RHH5205_R3576
29.3
RHH5262_R3634
16.8
RHH5297_R3663
25.7
Memory CD4 T-cell TFH nTPM: 13.9
Samples: 4
Max nTPM: 16.7
Min nTPM: 11.7
RHH5300_R3666
13.6
RHH5236_R3608
16.7
RHH5265_R3637
11.7
RHH5208_R3579
13.5
Memory CD4 T-cell Th1 nTPM: 19.0
Samples: 4
Max nTPM: 26.9
Min nTPM: 12.7
RHH5210_R3581
18.8
RHH5302_R3668
26.9
RHH5238_R3610
17.4
RHH5267_R3639
12.7
Memory CD4 T-cell Th1/Th17 nTPM: 17.8
Samples: 4
Max nTPM: 20.1
Min nTPM: 15.7
RHH5303_R3669
19.5
RHH5211_R3582
15.9
RHH5239_R3611
15.7
RHH5268_R3640
20.1
Memory CD4 T-cell Th17 nTPM: 22.4
Samples: 4
Max nTPM: 27.2
Min nTPM: 20.3
RHH5304_R3670
21.2
RHH5212_R3583
27.2
RHH5240_R3612
20.3
RHH5269_R3641
20.8
Memory CD4 T-cell Th2 nTPM: 12.7
Samples: 4
Max nTPM: 16.4
Min nTPM: 8.1
RHH5305_R3671
8.1
RHH5213_R3584
16.4
RHH5241_R3613
12.0
RHH5270_R3642
14.2
Naive CD4 T-cell nTPM: 13.4
Samples: 4
Max nTPM: 22.7
Min nTPM: 8.3
RHH5306_R3672
8.3
RHH5214_R3585
14.2
RHH5242_R3614
22.7
RHH5271_R3643
8.4
Naive CD8 T-cell nTPM: 13.4
Samples: 4
Max nTPM: 21.1
Min nTPM: 7.8
RHH5201_R3572
21.1
RHH5229_R3601
14.0
RHH5258_R3630
10.7
RHH5287_R3659
7.8
Non-Vd2 gdTCR nTPM: 8.7
Samples: 4
Max nTPM: 12.0
Min nTPM: 4.5
RHH5235_R3607
12.0
RHH5264_R3636
10.8
RHH5207_R3578
7.6
RHH5299_R3665
4.5
T-reg nTPM: 15.9
Samples: 4
Max nTPM: 21.6
Min nTPM: 6.7
RHH5301_R3667
17.2
RHH5237_R3609
18.0
RHH5266_R3638
6.7
RHH5209_R3580
21.6
Terminal effector memory CD4 T-cell nTPM: 9.7
Samples: 2
Max nTPM: 14.1
Min nTPM: 5.2
RHH5243_R3615
14.1
RHH5272_R3644
5.2
Terminal effector memory CD8 T-cell nTPM: 8.9
Samples: 4
Max nTPM: 15.6
Min nTPM: 4.2
RHH5232_R3604
8.0
RHH5204_R3575
15.6
RHH5261_R3633
4.2
RHH5296_R3662
7.8
Vd2 gdTCR nTPM: 18.6
Samples: 4
Max nTPM: 32.1
Min nTPM: 12.1
RHH5234_R3606
13.1
RHH5206_R3577
32.1
RHH5263_R3635
12.1
RHH5298_R3664
17.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
