We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
26.9
nTPM
Monaco:
51.7
nTPM
Schmiedel:
8.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.9
HPA sample
nTPM
gdT-cell nTPM: 21.8
Samples: 6
Max nTPM: 31.8
Min nTPM: 11.4
P10809_1007
14.7
P10809_1022
31.7
P10809_1041
31.8
P10809_1060
11.4
P10809_1077
19.6
P10809_1098
21.8
MAIT T-cell nTPM: 26.9
Samples: 6
Max nTPM: 35.9
Min nTPM: 8.6
P10809_1006
24.6
P10809_1024
34.7
P10809_1043
35.9
P10809_1062
32.5
P10809_1083
8.6
P10809_1097
25.2
Memory CD4 T-cell nTPM: 10.7
Samples: 6
Max nTPM: 16.1
Min nTPM: 6.5
P10809_1014
7.5
P10809_1026
10.4
P10809_1045
12.9
P10809_1064
10.5
P10809_1086
16.1
P10809_1113
6.5
Memory CD8 T-cell nTPM: 14.5
Samples: 5
Max nTPM: 24.3
Min nTPM: 4.7
P10809_1012
15.7
P10809_1027
16.6
P10809_1046
24.3
P10809_1065
11.2
P10809_1111
4.7
Naive CD4 T-cell nTPM: 2.0
Samples: 6
Max nTPM: 7.0
Min nTPM: 0.4
P10809_1015
0.4
P10809_1030
1.1
P10809_1049
1.1
P10809_1068
2.0
P10809_1085
7.0
P10809_1112
0.6
Naive CD8 T-cell nTPM: 7.9
Samples: 6
Max nTPM: 16.6
Min nTPM: 1.2
P10809_1016
1.2
P10809_1031
4.2
P10809_1050
8.0
P10809_1069
13.3
P10809_1087
16.6
P10809_1110
3.9
T-reg nTPM: 11.0
Samples: 6
Max nTPM: 20.8
Min nTPM: 0.1
P10809_1018
12.7
P10809_1037
15.6
P10809_1056
0.1
P10809_1075
8.7
P10809_1094
20.8
P10809_1106
8.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 5.3
Samples: 4
Max nTPM: 6.6
Min nTPM: 3.7
RHH5202_R3573
6.6
RHH5230_R3602
5.1
RHH5259_R3631
3.7
RHH5288_R3660
5.9
Effector memory CD8 T-cell nTPM: 16.5
Samples: 4
Max nTPM: 21.7
Min nTPM: 12.2
RHH5203_R3574
12.3
RHH5231_R3603
19.7
RHH5260_R3632
12.2
RHH5289_R3661
21.7
MAIT T-cell nTPM: 51.7
Samples: 4
Max nTPM: 73.4
Min nTPM: 28.9
RHH5233_R3605
59.9
RHH5205_R3576
28.9
RHH5262_R3634
73.4
RHH5297_R3663
44.5
Memory CD4 T-cell TFH nTPM: 4.2
Samples: 4
Max nTPM: 6.9
Min nTPM: 0.9
RHH5300_R3666
6.9
RHH5236_R3608
0.9
RHH5265_R3637
6.4
RHH5208_R3579
2.4
Memory CD4 T-cell Th1 nTPM: 9.0
Samples: 4
Max nTPM: 16.6
Min nTPM: 5.4
RHH5210_R3581
5.5
RHH5302_R3668
8.4
RHH5238_R3610
16.6
RHH5267_R3639
5.4
Memory CD4 T-cell Th1/Th17 nTPM: 17.4
Samples: 4
Max nTPM: 29.3
Min nTPM: 12.0
RHH5303_R3669
29.3
RHH5211_R3582
15.4
RHH5239_R3611
12.9
RHH5268_R3640
12.0
Memory CD4 T-cell Th17 nTPM: 20.3
Samples: 4
Max nTPM: 31.1
Min nTPM: 12.8
RHH5304_R3670
31.1
RHH5212_R3583
19.9
RHH5240_R3612
12.8
RHH5269_R3641
17.4
Memory CD4 T-cell Th2 nTPM: 5.8
Samples: 4
Max nTPM: 11.2
Min nTPM: 2.5
RHH5305_R3671
2.5
RHH5213_R3584
11.2
RHH5241_R3613
3.1
RHH5270_R3642
6.5
Naive CD4 T-cell nTPM: 1.8
Samples: 4
Max nTPM: 4.4
Min nTPM: 0.0
RHH5306_R3672
4.4
RHH5214_R3585
0.4
RHH5242_R3614
2.5
RHH5271_R3643
0.0
Naive CD8 T-cell nTPM: 3.1
Samples: 4
Max nTPM: 8.7
Min nTPM: 0.0
RHH5201_R3572
1.4
RHH5229_R3601
0.0
RHH5258_R3630
8.7
RHH5287_R3659
2.4
Non-Vd2 gdTCR nTPM: 29.9
Samples: 4
Max nTPM: 33.8
Min nTPM: 25.2
RHH5235_R3607
27.2
RHH5264_R3636
25.2
RHH5207_R3578
33.3
RHH5299_R3665
33.8
T-reg nTPM: 8.1
Samples: 4
Max nTPM: 13.0
Min nTPM: 2.9
RHH5301_R3667
8.5
RHH5237_R3609
2.9
RHH5266_R3638
8.0
RHH5209_R3580
13.0
Terminal effector memory CD4 T-cell nTPM: 39.7
Samples: 2
Max nTPM: 50.7
Min nTPM: 28.7
RHH5243_R3615
50.7
RHH5272_R3644
28.7
Terminal effector memory CD8 T-cell nTPM: 31.6
Samples: 4
Max nTPM: 48.4
Min nTPM: 14.9
RHH5232_R3604
48.4
RHH5204_R3575
14.9
RHH5261_R3633
23.7
RHH5296_R3662
39.4
Vd2 gdTCR nTPM: 18.5
Samples: 4
Max nTPM: 25.8
Min nTPM: 14.0
RHH5234_R3606
16.4
RHH5206_R3577
25.8
RHH5263_R3635
17.9
RHH5298_R3664
14.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
