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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1258.8
nTPM
Monaco:
480.4
nTPM
Schmiedel:
158.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1258.8
HPA sample
nTPM
gdT-cell nTPM: 810.8
Samples: 6
Max nTPM: 1122.7
Min nTPM: 606.5
P10809_1007
1122.7
P10809_1022
693.8
P10809_1041
906.4
P10809_1060
606.5
P10809_1077
725.5
P10809_1098
810.0
MAIT T-cell nTPM: 1194.8
Samples: 6
Max nTPM: 1398.8
Min nTPM: 943.9
P10809_1006
1398.8
P10809_1024
1255.0
P10809_1043
1073.9
P10809_1062
1106.7
P10809_1083
943.9
P10809_1097
1390.2
Memory CD4 T-cell nTPM: 1162.9
Samples: 6
Max nTPM: 1506.6
Min nTPM: 888.6
P10809_1014
1506.6
P10809_1026
1327.9
P10809_1045
1223.9
P10809_1064
946.7
P10809_1086
888.6
P10809_1113
1083.4
Memory CD8 T-cell nTPM: 1037.0
Samples: 5
Max nTPM: 1345.5
Min nTPM: 831.1
P10809_1012
1345.5
P10809_1027
1013.0
P10809_1046
1036.6
P10809_1065
831.1
P10809_1111
959.0
Naive CD4 T-cell nTPM: 1258.8
Samples: 6
Max nTPM: 1621.0
Min nTPM: 923.6
P10809_1015
1621.0
P10809_1030
1399.4
P10809_1049
1328.2
P10809_1068
1211.4
P10809_1085
923.6
P10809_1112
1069.1
Naive CD8 T-cell nTPM: 1135.9
Samples: 6
Max nTPM: 1780.9
Min nTPM: 742.8
P10809_1016
1780.9
P10809_1031
1172.1
P10809_1050
1083.9
P10809_1069
1002.4
P10809_1087
742.8
P10809_1110
1033.4
T-reg nTPM: 1086.7
Samples: 6
Max nTPM: 1163.7
Min nTPM: 1016.2
P10809_1018
1163.7
P10809_1037
1046.4
P10809_1056
1111.0
P10809_1075
1016.2
P10809_1094
1049.7
P10809_1106
1133.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
480.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 381.0
Samples: 4
Max nTPM: 470.6
Min nTPM: 197.9
RHH5202_R3573
197.9
RHH5230_R3602
428.9
RHH5259_R3631
470.6
RHH5288_R3660
426.6
Effector memory CD8 T-cell nTPM: 180.9
Samples: 4
Max nTPM: 247.9
Min nTPM: 115.9
RHH5203_R3574
160.1
RHH5231_R3603
199.7
RHH5260_R3632
247.9
RHH5289_R3661
115.9
MAIT T-cell nTPM: 304.7
Samples: 4
Max nTPM: 390.4
Min nTPM: 238.4
RHH5233_R3605
238.4
RHH5205_R3576
307.3
RHH5262_R3634
282.5
RHH5297_R3663
390.4
Memory CD4 T-cell TFH nTPM: 337.5
Samples: 4
Max nTPM: 501.6
Min nTPM: 231.8
RHH5300_R3666
331.5
RHH5236_R3608
501.6
RHH5265_R3637
284.9
RHH5208_R3579
231.8
Memory CD4 T-cell Th1 nTPM: 480.4
Samples: 4
Max nTPM: 697.8
Min nTPM: 245.6
RHH5210_R3581
245.6
RHH5302_R3668
609.3
RHH5238_R3610
697.8
RHH5267_R3639
369.0
Memory CD4 T-cell Th1/Th17 nTPM: 354.9
Samples: 4
Max nTPM: 406.3
Min nTPM: 262.8
RHH5303_R3669
356.4
RHH5211_R3582
262.8
RHH5239_R3611
406.3
RHH5268_R3640
393.9
Memory CD4 T-cell Th17 nTPM: 323.0
Samples: 4
Max nTPM: 416.6
Min nTPM: 248.5
RHH5304_R3670
416.6
RHH5212_R3583
305.3
RHH5240_R3612
321.7
RHH5269_R3641
248.5
Memory CD4 T-cell Th2 nTPM: 395.7
Samples: 4
Max nTPM: 553.7
Min nTPM: 282.7
RHH5305_R3671
553.7
RHH5213_R3584
310.8
RHH5241_R3613
435.4
RHH5270_R3642
282.7
Naive CD4 T-cell nTPM: 448.1
Samples: 4
Max nTPM: 501.6
Min nTPM: 392.2
RHH5306_R3672
501.6
RHH5214_R3585
478.4
RHH5242_R3614
420.3
RHH5271_R3643
392.2
Naive CD8 T-cell nTPM: 419.5
Samples: 4
Max nTPM: 562.7
Min nTPM: 218.8
RHH5201_R3572
218.8
RHH5229_R3601
562.7
RHH5258_R3630
378.4
RHH5287_R3659
517.9
Non-Vd2 gdTCR nTPM: 237.2
Samples: 4
Max nTPM: 303.0
Min nTPM: 165.7
RHH5235_R3607
303.0
RHH5264_R3636
196.5
RHH5207_R3578
165.7
RHH5299_R3665
283.4
T-reg nTPM: 358.3
Samples: 4
Max nTPM: 473.4
Min nTPM: 313.7
RHH5301_R3667
473.4
RHH5237_R3609
313.7
RHH5266_R3638
323.0
RHH5209_R3580
322.9
Terminal effector memory CD4 T-cell nTPM: 237.8
Samples: 2
Max nTPM: 254.4
Min nTPM: 221.2
RHH5243_R3615
254.4
RHH5272_R3644
221.2
Terminal effector memory CD8 T-cell nTPM: 288.5
Samples: 4
Max nTPM: 480.5
Min nTPM: 168.5
RHH5232_R3604
168.5
RHH5204_R3575
480.5
RHH5261_R3633
272.7
RHH5296_R3662
232.3
Vd2 gdTCR nTPM: 421.4
Samples: 4
Max nTPM: 555.3
Min nTPM: 294.6
RHH5234_R3606
294.6
RHH5206_R3577
555.3
RHH5263_R3635
327.4
RHH5298_R3664
508.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.