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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
100.8
nTPM
Monaco:
497.3
nTPM
Schmiedel:
2269.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
100.8
HPA sample
nTPM
gdT-cell nTPM: 67.4
Samples: 6
Max nTPM: 78.6
Min nTPM: 49.6
P10809_1007
67.8
P10809_1022
78.6
P10809_1041
70.3
P10809_1060
49.6
P10809_1077
75.5
P10809_1098
62.7
MAIT T-cell nTPM: 100.8
Samples: 6
Max nTPM: 115.4
Min nTPM: 84.5
P10809_1006
115.4
P10809_1024
108.3
P10809_1043
84.5
P10809_1062
87.4
P10809_1083
101.0
P10809_1097
108.4
Memory CD4 T-cell nTPM: 57.1
Samples: 6
Max nTPM: 71.9
Min nTPM: 44.9
P10809_1014
64.5
P10809_1026
44.9
P10809_1045
54.7
P10809_1064
50.6
P10809_1086
71.9
P10809_1113
55.7
Memory CD8 T-cell nTPM: 55.8
Samples: 5
Max nTPM: 63.4
Min nTPM: 49.5
P10809_1012
63.4
P10809_1027
55.7
P10809_1046
53.4
P10809_1065
56.8
P10809_1111
49.5
Naive CD4 T-cell nTPM: 33.6
Samples: 6
Max nTPM: 50.5
Min nTPM: 25.9
P10809_1015
50.5
P10809_1030
31.4
P10809_1049
25.9
P10809_1068
30.4
P10809_1085
31.8
P10809_1112
31.5
Naive CD8 T-cell nTPM: 40.3
Samples: 6
Max nTPM: 60.2
Min nTPM: 30.1
P10809_1016
42.0
P10809_1031
30.1
P10809_1050
33.0
P10809_1069
42.5
P10809_1087
60.2
P10809_1110
33.7
T-reg nTPM: 73.0
Samples: 6
Max nTPM: 81.7
Min nTPM: 57.0
P10809_1018
81.7
P10809_1037
72.1
P10809_1056
57.0
P10809_1075
76.8
P10809_1094
73.3
P10809_1106
77.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
497.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 183.4
Samples: 4
Max nTPM: 237.7
Min nTPM: 148.9
RHH5202_R3573
148.9
RHH5230_R3602
237.7
RHH5259_R3631
167.0
RHH5288_R3660
179.9
Effector memory CD8 T-cell nTPM: 263.7
Samples: 4
Max nTPM: 299.0
Min nTPM: 207.5
RHH5203_R3574
207.5
RHH5231_R3603
271.9
RHH5260_R3632
299.0
RHH5289_R3661
276.5
MAIT T-cell nTPM: 497.3
Samples: 4
Max nTPM: 640.5
Min nTPM: 366.7
RHH5233_R3605
517.9
RHH5205_R3576
640.5
RHH5262_R3634
464.1
RHH5297_R3663
366.7
Memory CD4 T-cell TFH nTPM: 123.4
Samples: 4
Max nTPM: 135.5
Min nTPM: 115.1
RHH5300_R3666
121.2
RHH5236_R3608
121.7
RHH5265_R3637
135.5
RHH5208_R3579
115.1
Memory CD4 T-cell Th1 nTPM: 174.3
Samples: 4
Max nTPM: 206.3
Min nTPM: 136.3
RHH5210_R3581
161.6
RHH5302_R3668
136.3
RHH5238_R3610
206.3
RHH5267_R3639
192.9
Memory CD4 T-cell Th1/Th17 nTPM: 273.3
Samples: 4
Max nTPM: 295.4
Min nTPM: 237.0
RHH5303_R3669
237.0
RHH5211_R3582
279.4
RHH5239_R3611
295.4
RHH5268_R3640
281.2
Memory CD4 T-cell Th17 nTPM: 349.0
Samples: 4
Max nTPM: 481.1
Min nTPM: 275.3
RHH5304_R3670
324.1
RHH5212_R3583
315.3
RHH5240_R3612
481.1
RHH5269_R3641
275.3
Memory CD4 T-cell Th2 nTPM: 268.6
Samples: 4
Max nTPM: 325.6
Min nTPM: 232.3
RHH5305_R3671
232.3
RHH5213_R3584
325.6
RHH5241_R3613
241.2
RHH5270_R3642
275.4
Naive CD4 T-cell nTPM: 104.1
Samples: 4
Max nTPM: 111.4
Min nTPM: 91.3
RHH5306_R3672
91.3
RHH5214_R3585
103.0
RHH5242_R3614
111.4
RHH5271_R3643
110.6
Naive CD8 T-cell nTPM: 101.7
Samples: 4
Max nTPM: 126.1
Min nTPM: 71.9
RHH5201_R3572
71.9
RHH5229_R3601
126.1
RHH5258_R3630
102.8
RHH5287_R3659
106.1
Non-Vd2 gdTCR nTPM: 318.2
Samples: 4
Max nTPM: 408.0
Min nTPM: 232.7
RHH5235_R3607
369.7
RHH5264_R3636
262.4
RHH5207_R3578
408.0
RHH5299_R3665
232.7
T-reg nTPM: 176.1
Samples: 4
Max nTPM: 212.8
Min nTPM: 150.6
RHH5301_R3667
150.6
RHH5237_R3609
156.7
RHH5266_R3638
212.8
RHH5209_R3580
184.1
Terminal effector memory CD4 T-cell nTPM: 375.4
Samples: 2
Max nTPM: 465.7
Min nTPM: 285.1
RHH5243_R3615
465.7
RHH5272_R3644
285.1
Terminal effector memory CD8 T-cell nTPM: 321.5
Samples: 4
Max nTPM: 388.4
Min nTPM: 234.2
RHH5232_R3604
388.0
RHH5204_R3575
234.2
RHH5261_R3633
388.4
RHH5296_R3662
275.4
Vd2 gdTCR nTPM: 303.0
Samples: 4
Max nTPM: 366.3
Min nTPM: 200.4
RHH5234_R3606
304.8
RHH5206_R3577
366.3
RHH5263_R3635
340.4
RHH5298_R3664
200.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
