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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
194.4
nTPM
FANTOM5:
231.2
Scaled Tags Per Million
Pig:
97.6
nTPM
Allen mouse:
14.5
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
194.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 160.0
2188
Female, age 91, both hemispheres
201.4
2301
Female, age 85, both hemispheres
181.6
2090
Male, age 80, both hemispheres
165.9
1984
Male, age 76, both hemispheres
91.1
Dorsal cochlear nucleus nTPM: 154.4
2378
Male, age 80, both hemispheres
169.6
2370
Male, age 61, both hemispheres
154.2
2187
Female, age 91, both hemispheres
152.1
2802
Male, age 74, right hemisphere
148.4
2058
Male, age 76, both hemispheres
148.0
Dorsal tegmental nucleus nTPM: 147.4
2083
Male, age 80, both hemispheres
211.3
2326
Male, age 74, both hemispheres
151.1
2358
Male, age 61, both hemispheres
115.5
1936
Male, age 76, left hemisphere
111.8
Dorsolateral tegmental area nTPM: 156.5
2751
Female, age 85, both hemispheres
234.5
2654
Male, age 80, both hemispheres
186.6
2337
Male, age 61, both hemispheres
162.4
2360
Male, age 74, both hemispheres
107.2
2141
Male, age 76, both hemispheres
91.9
Kolliker-Fuse nucleus nTPM: 166.5
2793
Female, age 91, left hemisphere
213.1
2163
Male, age 80, both hemispheres
145.4
2315
Male, age 76, right hemisphere
141.1
Lateral lemniscal nuclei nTPM: 150.0
2320
Female, age 91, left hemisphere
186.7
2036
Male, age 80, both hemispheres
175.8
2169
Male, age 76, both hemispheres
144.6
2746
Female, age 85, left hemisphere
137.5
2453
Male, age 74, right hemisphere
105.1
Lateral parabrachial nucleus nTPM: 194.4
2792
Male, age 76, both hemispheres
289.6
2013
Male, age 80, both hemispheres
205.8
2790
Male, age 61, both hemispheres
143.7
2139
Female, age 85, right hemisphere
138.6
Lateral vestibular nucleus nTPM: 160.1
2311
Male, age 80, both hemispheres
180.6
2184
Male, age 76, both hemispheres
139.6
Locus coeruleus nTPM: 98.7
2162
Male, age 80, both hemispheres
122.1
2317
Female, age 72, unknown
116.5
2720
Male, age 74, both hemispheres
113.2
2788
Male, age 74, unknown
89.8
2123
Female, age 91, both hemispheres
88.4
2014
Male, age 55, unknown
85.5
1980
Male, age 76, both hemispheres
75.5
Medial parabrachial nucleus nTPM: 166.5
2463
Female, age 85, right hemisphere
194.7
2170
Female, age 91, both hemispheres
190.3
2854
Male, age 80, both hemispheres
159.5
2156
Male, age 61, both hemispheres
145.1
2786
Male, age 76, both hemispheres
142.6
Medial periolivary nuclei nTPM: 135.0
2791
Male, age 74, right hemisphere
164.6
2081
Male, age 80, both hemispheres
161.1
2063
Male, age 76, both hemispheres
139.8
2458
Female, age 91, both hemispheres
137.8
2171
Female, age 85, both hemispheres
71.5
Motor facial nucleus nTPM: 148.9
2126
Male, age 61, both hemispheres
189.7
2697
Female, age 85, both hemispheres
182.1
2365
Male, age 74, right hemisphere
163.1
2062
Male, age 76, both hemispheres
125.4
2795
Female, age 91, both hemispheres
117.6
2327
Male, age 80, both hemispheres
115.7
Motor trigeminal nucleus nTPM: 140.8
2309
Male, age 76, both hemispheres
143.0
2560
Male, age 74, both hemispheres
142.4
2079
Male, age 80, both hemispheres
142.3
2321
Female, age 91, both hemispheres
141.9
2335
Male, age 61, both hemispheres
134.6
Nuclei of the trapezoid body nTPM: 120.5
2166
Male, age 80, both hemispheres
150.0
1983
Male, age 76, both hemispheres
135.0
2368
Female, age 91, both hemispheres
131.5
2159
Male, age 61, both hemispheres
122.5
2735
Female, age 85, both hemispheres
63.5
Nucleus raphe magnus nTPM: 116.9
2328
Male, age 80, both hemispheres
160.9
2459
Female, age 91, both hemispheres
152.9
2051
Male, age 76, both hemispheres
148.7
2455
Male, age 74, both hemispheres
115.2
2160
Male, age 61, both hemispheres
71.9
2172
Female, age 85, both hemispheres
52.1
Paramedian reticular nucleus nTPM: 146.1
2057
Male, age 80, both hemispheres
182.5
2313
Male, age 61, both hemispheres
144.0
2050
Female, age 85, both hemispheres
131.8
2052
Male, age 76, both hemispheres
126.1
Pedunculopontine tegmental nucleus nTPM: 149.6
2334
Male, age 80, both hemispheres
173.2
1921
Female, age 85, both hemispheres
140.1
2338
Male, age 61, both hemispheres
135.6
Pontine nuclei nTPM: 152.1
2454
Male, age 74, left hemisphere
207.5
2319
Female, age 91, both hemispheres
196.0
1968
Male, age 76, left hemisphere
160.4
2109
Female, age 72, unknown
157.0
2115
Male, age 80, left hemisphere
153.4
1863
Male, age 55, unknown
147.5
2727
Male, age 61, right hemisphere
97.8
2787
Female, age 85, both hemispheres
97.1
Pontine raphe nucleus nTPM: 135.9
2853
Male, age 76, midline
146.4
2122
Female, age 85, midline
125.5
Posteroventral cochlear nucleus nTPM: 190.1
2135
Female, age 91, both hemispheres
233.1
2341
Male, age 80, both hemispheres
214.0
2070
Male, age 76, both hemispheres
199.3
2371
Male, age 61, both hemispheres
183.2
2752
Female, age 85, both hemispheres
121.0
Principal sensory trigeminal nucleus nTPM: 123.5
2367
Female, age 91, left hemisphere
169.9
2324
Male, age 76, both hemispheres
127.3
2008
Male, age 80, left hemisphere
108.3
2158
Male, age 61, both hemispheres
88.3
Reticular pontine nucleus, caudal nTPM: 157.7
2092
Male, age 76, both hemispheres
192.7
2559
Male, age 74, both hemispheres
168.2
2457
Female, age 91, both hemispheres
158.8
2332
Male, age 80, right hemisphere
111.3
Reticular pontine nucleus, oral nTPM: 185.9
2366
Female, age 91, both hemispheres
239.3
1939
Male, age 80, both hemispheres
212.8
2167
Male, age 76, both hemispheres
174.4
2012
Female, age 85, both hemispheres
163.3
2361
Male, age 74, both hemispheres
139.6
Reticulotegmental nucleus nTPM: 128.7
2333
Male, age 80, both hemispheres
155.3
2452
Male, age 74, both hemispheres
142.5
2322
Female, age 91, both hemispheres
130.8
2325
Male, age 76, both hemispheres
86.2
Spinal trigeminal nucleus, oral nTPM: 139.9
1978
Male, age 76, both hemispheres
176.3
2164
Male, age 80, both hemispheres
138.6
2737
Female, age 85, both hemispheres
104.7
Subcoeruleus area nTPM: 161.7
2369
Female, age 85, left hemisphere
271.5
2089
Male, age 76, left hemisphere
145.3
1958
Male, age 80, both hemispheres
143.6
2323
Female, age 91, left hemisphere
124.8
2451
Male, age 74, both hemispheres
123.2
Superior olive nTPM: 153.1
2020
Male, age 76, both hemispheres
189.4
2364
Male, age 74, right hemisphere
168.8
2329
Male, age 80, right hemisphere
148.8
1875
Female, age 85, both hemispheres
134.2
2561
Female, age 91, both hemispheres
124.1
Ventral periolivary nuclei nTPM: 135.3
2023
Male, age 76, both hemispheres
230.1
2165
Male, age 80, both hemispheres
126.3
2130
Female, age 85, both hemispheres
92.8
2794
Female, age 91, left hemisphere
92.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 159.4
2359
Male, age 61, both hemispheres
214.3
2456
Female, age 91, both hemispheres
164.9
1959
Male, age 76, both hemispheres
163.0
2161
Male, age 80, both hemispheres
156.4
2840
Female, age 85, both hemispheres
142.9
2449
Male, age 74, both hemispheres
115.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
97.6
Pig sample
Sample description
nTPM
Pons nTPM: 97.6
Samples: 4
Max nTPM: 188.2
Min nTPM: 60.0
Sample A
Female
60.0
Sample B
Female
61.2
Sample C
Male
81.0
Sample D
Male
188.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
