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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
294.2
nTPM
Monaco:
381.8
nTPM
Schmiedel:
389.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
294.2
HPA sample
nTPM
gdT-cell nTPM: 4.7
Samples: 6
Max nTPM: 9.3
Min nTPM: 1.4
P10809_1007
2.2
P10809_1022
5.9
P10809_1041
9.3
P10809_1060
5.2
P10809_1077
1.4
P10809_1098
4.1
MAIT T-cell nTPM: 2.1
Samples: 6
Max nTPM: 3.9
Min nTPM: 0.0
P10809_1006
3.9
P10809_1024
3.9
P10809_1043
0.0
P10809_1062
0.6
P10809_1083
3.4
P10809_1097
0.6
Memory CD4 T-cell nTPM: 218.3
Samples: 6
Max nTPM: 298.5
Min nTPM: 108.9
P10809_1014
241.5
P10809_1026
279.1
P10809_1045
253.6
P10809_1064
127.9
P10809_1086
108.9
P10809_1113
298.5
Memory CD8 T-cell nTPM: 38.4
Samples: 5
Max nTPM: 69.1
Min nTPM: 3.9
P10809_1012
69.1
P10809_1027
22.7
P10809_1046
32.7
P10809_1065
3.9
P10809_1111
63.5
Naive CD4 T-cell nTPM: 294.2
Samples: 6
Max nTPM: 371.5
Min nTPM: 198.5
P10809_1015
276.2
P10809_1030
315.5
P10809_1049
371.5
P10809_1068
271.9
P10809_1085
198.5
P10809_1112
331.5
Naive CD8 T-cell nTPM: 138.5
Samples: 6
Max nTPM: 216.4
Min nTPM: 8.5
P10809_1016
214.0
P10809_1031
170.9
P10809_1050
122.3
P10809_1069
99.1
P10809_1087
8.5
P10809_1110
216.4
T-reg nTPM: 234.3
Samples: 6
Max nTPM: 389.5
Min nTPM: 175.7
P10809_1018
175.7
P10809_1037
205.1
P10809_1056
389.5
P10809_1075
189.6
P10809_1094
194.6
P10809_1106
251.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
381.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 95.2
Samples: 4
Max nTPM: 123.4
Min nTPM: 50.0
RHH5202_R3573
118.9
RHH5230_R3602
88.4
RHH5259_R3631
50.0
RHH5288_R3660
123.4
Effector memory CD8 T-cell nTPM: 11.9
Samples: 4
Max nTPM: 15.3
Min nTPM: 4.8
RHH5203_R3574
4.8
RHH5231_R3603
14.8
RHH5260_R3632
12.6
RHH5289_R3661
15.3
MAIT T-cell nTPM: 3.3
Samples: 4
Max nTPM: 4.6
Min nTPM: 1.5
RHH5233_R3605
4.6
RHH5205_R3576
1.5
RHH5262_R3634
4.0
RHH5297_R3663
2.9
Memory CD4 T-cell TFH nTPM: 334.7
Samples: 4
Max nTPM: 451.4
Min nTPM: 271.4
RHH5300_R3666
310.4
RHH5236_R3608
451.4
RHH5265_R3637
271.4
RHH5208_R3579
305.5
Memory CD4 T-cell Th1 nTPM: 214.3
Samples: 4
Max nTPM: 303.1
Min nTPM: 141.6
RHH5210_R3581
267.9
RHH5302_R3668
303.1
RHH5238_R3610
144.4
RHH5267_R3639
141.6
Memory CD4 T-cell Th1/Th17 nTPM: 156.4
Samples: 4
Max nTPM: 192.2
Min nTPM: 122.3
RHH5303_R3669
192.2
RHH5211_R3582
184.1
RHH5239_R3611
122.3
RHH5268_R3640
126.8
Memory CD4 T-cell Th17 nTPM: 199.3
Samples: 4
Max nTPM: 283.5
Min nTPM: 145.6
RHH5304_R3670
145.6
RHH5212_R3583
283.5
RHH5240_R3612
212.4
RHH5269_R3641
155.5
Memory CD4 T-cell Th2 nTPM: 325.2
Samples: 4
Max nTPM: 519.1
Min nTPM: 207.7
RHH5305_R3671
318.0
RHH5213_R3584
256.1
RHH5241_R3613
519.1
RHH5270_R3642
207.7
Naive CD4 T-cell nTPM: 381.8
Samples: 4
Max nTPM: 415.4
Min nTPM: 293.0
RHH5306_R3672
415.4
RHH5214_R3585
413.7
RHH5242_R3614
405.2
RHH5271_R3643
293.0
Naive CD8 T-cell nTPM: 219.7
Samples: 4
Max nTPM: 299.6
Min nTPM: 172.9
RHH5201_R3572
231.9
RHH5229_R3601
174.3
RHH5258_R3630
299.6
RHH5287_R3659
172.9
Non-Vd2 gdTCR nTPM: 28.1
Samples: 4
Max nTPM: 34.6
Min nTPM: 18.8
RHH5235_R3607
24.7
RHH5264_R3636
34.3
RHH5207_R3578
18.8
RHH5299_R3665
34.6
T-reg nTPM: 246.0
Samples: 4
Max nTPM: 360.2
Min nTPM: 147.5
RHH5301_R3667
299.6
RHH5237_R3609
360.2
RHH5266_R3638
176.7
RHH5209_R3580
147.5
Terminal effector memory CD4 T-cell nTPM: 38.8
Samples: 2
Max nTPM: 74.7
Min nTPM: 2.8
RHH5243_R3615
2.8
RHH5272_R3644
74.7
Terminal effector memory CD8 T-cell nTPM: 6.2
Samples: 4
Max nTPM: 14.5
Min nTPM: 0.9
RHH5232_R3604
0.9
RHH5204_R3575
2.9
RHH5261_R3633
6.6
RHH5296_R3662
14.5
Vd2 gdTCR nTPM: 18.4
Samples: 4
Max nTPM: 33.6
Min nTPM: 6.8
RHH5234_R3606
12.2
RHH5206_R3577
6.8
RHH5263_R3635
33.6
RHH5298_R3664
21.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
