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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
82.3
nTPM
Monaco:
171.1
nTPM
Schmiedel:
221.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
82.3
HPA sample
nTPM
gdT-cell nTPM: 44.6
Samples: 6
Max nTPM: 58.9
Min nTPM: 31.1
P10809_1007
45.4
P10809_1022
55.0
P10809_1041
58.9
P10809_1060
40.8
P10809_1077
31.1
P10809_1098
36.2
MAIT T-cell nTPM: 57.5
Samples: 6
Max nTPM: 67.2
Min nTPM: 44.2
P10809_1006
59.7
P10809_1024
54.9
P10809_1043
61.6
P10809_1062
67.2
P10809_1083
44.2
P10809_1097
57.6
Memory CD4 T-cell nTPM: 54.2
Samples: 6
Max nTPM: 71.2
Min nTPM: 35.7
P10809_1014
63.9
P10809_1026
56.6
P10809_1045
71.2
P10809_1064
45.9
P10809_1086
35.7
P10809_1113
51.9
Memory CD8 T-cell nTPM: 46.9
Samples: 5
Max nTPM: 63.8
Min nTPM: 37.4
P10809_1012
63.8
P10809_1027
37.8
P10809_1046
54.4
P10809_1065
37.4
P10809_1111
41.3
Naive CD4 T-cell nTPM: 46.8
Samples: 6
Max nTPM: 57.8
Min nTPM: 31.3
P10809_1015
57.8
P10809_1030
36.7
P10809_1049
52.5
P10809_1068
55.3
P10809_1085
31.3
P10809_1112
47.0
Naive CD8 T-cell nTPM: 49.1
Samples: 6
Max nTPM: 66.6
Min nTPM: 31.2
P10809_1016
66.6
P10809_1031
48.1
P10809_1050
59.5
P10809_1069
39.4
P10809_1087
31.2
P10809_1110
50.0
T-reg nTPM: 82.3
Samples: 6
Max nTPM: 97.4
Min nTPM: 69.0
P10809_1018
97.4
P10809_1037
69.0
P10809_1056
94.3
P10809_1075
74.0
P10809_1094
90.2
P10809_1106
69.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
171.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 146.6
Samples: 4
Max nTPM: 190.8
Min nTPM: 111.7
RHH5202_R3573
143.2
RHH5230_R3602
190.8
RHH5259_R3631
140.8
RHH5288_R3660
111.7
Effector memory CD8 T-cell nTPM: 136.9
Samples: 4
Max nTPM: 149.3
Min nTPM: 115.7
RHH5203_R3574
144.9
RHH5231_R3603
115.7
RHH5260_R3632
137.6
RHH5289_R3661
149.3
MAIT T-cell nTPM: 139.3
Samples: 4
Max nTPM: 163.0
Min nTPM: 121.6
RHH5233_R3605
163.0
RHH5205_R3576
140.5
RHH5262_R3634
121.6
RHH5297_R3663
132.2
Memory CD4 T-cell TFH nTPM: 135.4
Samples: 4
Max nTPM: 155.8
Min nTPM: 104.9
RHH5300_R3666
155.8
RHH5236_R3608
104.9
RHH5265_R3637
140.9
RHH5208_R3579
140.1
Memory CD4 T-cell Th1 nTPM: 139.2
Samples: 4
Max nTPM: 142.7
Min nTPM: 135.1
RHH5210_R3581
135.1
RHH5302_R3668
142.7
RHH5238_R3610
137.3
RHH5267_R3639
141.8
Memory CD4 T-cell Th1/Th17 nTPM: 157.5
Samples: 4
Max nTPM: 192.8
Min nTPM: 116.0
RHH5303_R3669
192.8
RHH5211_R3582
153.3
RHH5239_R3611
168.0
RHH5268_R3640
116.0
Memory CD4 T-cell Th17 nTPM: 171.1
Samples: 4
Max nTPM: 182.5
Min nTPM: 149.8
RHH5304_R3670
179.3
RHH5212_R3583
149.8
RHH5240_R3612
172.7
RHH5269_R3641
182.5
Memory CD4 T-cell Th2 nTPM: 170.8
Samples: 4
Max nTPM: 198.0
Min nTPM: 142.6
RHH5305_R3671
154.8
RHH5213_R3584
187.8
RHH5241_R3613
142.6
RHH5270_R3642
198.0
Naive CD4 T-cell nTPM: 155.4
Samples: 4
Max nTPM: 180.2
Min nTPM: 119.7
RHH5306_R3672
180.2
RHH5214_R3585
119.7
RHH5242_R3614
158.3
RHH5271_R3643
163.5
Naive CD8 T-cell nTPM: 155.8
Samples: 4
Max nTPM: 180.3
Min nTPM: 134.3
RHH5201_R3572
180.3
RHH5229_R3601
135.0
RHH5258_R3630
134.3
RHH5287_R3659
173.4
Non-Vd2 gdTCR nTPM: 118.5
Samples: 4
Max nTPM: 121.3
Min nTPM: 115.1
RHH5235_R3607
117.7
RHH5264_R3636
119.7
RHH5207_R3578
121.3
RHH5299_R3665
115.1
T-reg nTPM: 145.9
Samples: 4
Max nTPM: 167.7
Min nTPM: 128.3
RHH5301_R3667
155.4
RHH5237_R3609
128.3
RHH5266_R3638
167.7
RHH5209_R3580
132.2
Terminal effector memory CD4 T-cell nTPM: 118.1
Samples: 2
Max nTPM: 132.7
Min nTPM: 103.4
RHH5243_R3615
103.4
RHH5272_R3644
132.7
Terminal effector memory CD8 T-cell nTPM: 124.5
Samples: 4
Max nTPM: 143.1
Min nTPM: 96.8
RHH5232_R3604
143.1
RHH5204_R3575
96.8
RHH5261_R3633
131.4
RHH5296_R3662
126.8
Vd2 gdTCR nTPM: 132.9
Samples: 4
Max nTPM: 173.7
Min nTPM: 113.4
RHH5234_R3606
129.3
RHH5206_R3577
113.4
RHH5263_R3635
173.7
RHH5298_R3664
115.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
