HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:32.9 nTPM
HPA Brain:43.3 nTPM
GTEx:32.9 nTPM
FANTOM5:54.9 Scaled Tags Per Million
Pig:26.7 nTPM
Mouse:44.6 nTPM
Allen mouse:6.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.3
Sample id Sample description nTPM
Hippocampus
nTPM: 38.7
2148 Female, age 91, left hemisphere 43.0
1855 Male, age 76, left hemisphere 39.6
1898 Male, age 80, left hemisphere 38.7
2621 Female, age 67, right hemisphere 38.7
2529 Female, age 94, left hemisphere 37.0
1911 Female, age 85, right hemisphere 35.2
Dentate gyrus
nTPM: 37.0
2010 Male, age 76, both hemispheres 43.4
1927 Female, age 91, both hemispheres 39.6
2531 Female, age 67, both hemispheres 36.7
2530 Female, age 94, left hemisphere 34.5
2246 Female, age 85, both hemispheres 33.9
2528 Male, age 74, both hemispheres 33.7
Entorhinal gyrus
nTPM: 36.3
2613 Female, age 94, left hemisphere 41.1
2686 Male, age 75, right hemisphere 39.4
2117 Female, age 91, right hemisphere 36.6
2764 Male, age 80, right hemisphere 35.6
1938 Female, age 85, left hemisphere 32.8
1787 Male, age 76, left hemisphere 32.5
Hippocampus, CA1
nTPM: 41.3
2045 Male, age 76, both hemispheres 48.8
1873 Female, age 85, both hemispheres 45.0
2749 Male, age 80, left hemisphere 40.7
2082 Female, age 91, right hemisphere 38.1
2527 Male, age 74, both hemispheres 33.9
Hippocampus, CA2
nTPM: 38.8
1892 Male, age 76, both hemispheres 48.8
2437 Female, age 94, left hemisphere 39.1
1963 Male, age 80, left hemisphere 38.7
1940 Female, age 85, left hemisphere 36.8
2113 Female, age 91, right hemisphere 35.1
2249 Male, age 74, both hemispheres 34.3
Hippocampus, CA3
nTPM: 43.3
2620 Female, age 94, left hemisphere 58.6
2861 Female, age 67, both hemispheres 45.2
1867 Male, age 76, both hemispheres 41.7
2137 Male, age 80, left hemisphere 40.8
2436 Male, age 74, both hemispheres 40.8
1891 Female, age 85, both hemispheres 32.6
Parahippocampal cortex
nTPM: 35.4
2018 Male, age 76, both hemispheres 42.4
2622 Female, age 67, right hemisphere 38.5
2245 Female, age 91, both hemispheres 37.6
1933 Female, age 85, both hemispheres 37.4
2532 Female, age 72, left hemisphere 36.5
1850 Male, age 80, both hemispheres 33.3
2250 Female, age 67, right hemisphere 32.6
2692 Male, age 74, both hemispheres 32.5
2693 Female, age 94, both hemispheres 32.3
1990 Female, age 91, right hemisphere 30.4
Perirhinal gyrus
nTPM: 37.1
1794 Male, age 80, right hemisphere 43.0
1841 Female, age 85, right hemisphere 40.8
2848 Male, age 76, right hemisphere 38.7
1847 Female, age 91, left hemisphere 32.1
2521 Female, age 94, right hemisphere 30.9
Subiculum
nTPM: 35.9
2042 Male, age 76, both hemispheres 41.5
2729 Female, age 91, right hemisphere 40.0
2438 Female, age 94, left hemisphere 37.5
1901 Male, age 80, both hemispheres 33.6
2619 Male, age 74, both hemispheres 31.7
1977 Female, age 85, both hemispheres 31.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.9
Samples: 197

Max nTPM: 47.2
Min nTPM: 18.7
Std nTPM: 5.0
Median nTPM: 33.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 47.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 44.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 43.5
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 43.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 42.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 42.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 42.2
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 42.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 41.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 41.6
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 41.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.9
FF:10153-102I9 76 years, female 60.1
FF:10169-103B7 60 years, female 49.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.7
Pig sample Sample description nTPM
Subiculum
nTPM: 22.2
Samples: 4

Max nTPM: 28.0
Min nTPM: 19.6
Sample A Female 28.0
Sample B Female 19.6
Sample C Male 20.8
Sample D Male 20.3
Dorsal hippocampus
nTPM: 26.7
Samples: 4

Max nTPM: 34.4
Min nTPM: 20.7
Sample A Female 34.4
Sample B Female 27.1
Sample C Male 24.6
Sample D Male 20.7
Entorhinal cortex
nTPM: 25.4
Samples: 4

Max nTPM: 27.1
Min nTPM: 21.8
Sample A Female 27.1
Sample B Female 25.9
Sample C Male 26.6
Sample D Male 21.8
Ventral hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 31.8
Min nTPM: 16.7
Sample A Female 21.9
Sample B Female 16.7
Sample C Male 27.4
Sample D Male 31.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.4
Samples: 4

Max nTPM: 39.9
Min nTPM: 36.5
Sample A Male 37.1
Sample B Male 39.9
Sample C Female 39.9
Sample D Female 36.5
Hippocampal formation
nTPM: 44.6
Samples: 4

Max nTPM: 46.7
Min nTPM: 41.0
Sample A Male 41.0
Sample B Male 44.5
Sample C Female 46.7
Sample D Female 46.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.3
68745492 Antisense, RP_050210_02_A10, Mouse strain C57BL/6J (56 days, male) 6.3

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