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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
53.8
nTPM
Monaco:
222.4
nTPM
Schmiedel:
206.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
53.8
HPA sample
nTPM
gdT-cell nTPM: 39.5
Samples: 6
Max nTPM: 78.7
Min nTPM: 24.0
P10809_1007
24.0
P10809_1022
78.7
P10809_1041
50.0
P10809_1060
27.6
P10809_1077
32.4
P10809_1098
24.1
MAIT T-cell nTPM: 28.4
Samples: 6
Max nTPM: 42.2
Min nTPM: 12.0
P10809_1006
12.0
P10809_1024
42.2
P10809_1043
33.9
P10809_1062
19.0
P10809_1083
27.8
P10809_1097
35.3
Memory CD4 T-cell nTPM: 39.4
Samples: 6
Max nTPM: 55.0
Min nTPM: 17.0
P10809_1014
17.0
P10809_1026
50.7
P10809_1045
43.5
P10809_1064
24.3
P10809_1086
45.7
P10809_1113
55.0
Memory CD8 T-cell nTPM: 43.3
Samples: 5
Max nTPM: 65.4
Min nTPM: 22.5
P10809_1012
22.5
P10809_1027
51.6
P10809_1046
50.7
P10809_1065
26.1
P10809_1111
65.4
Naive CD4 T-cell nTPM: 44.3
Samples: 6
Max nTPM: 67.1
Min nTPM: 26.5
P10809_1015
26.5
P10809_1030
47.3
P10809_1049
31.8
P10809_1068
35.9
P10809_1085
67.1
P10809_1112
57.1
Naive CD8 T-cell nTPM: 53.8
Samples: 6
Max nTPM: 67.8
Min nTPM: 41.9
P10809_1016
45.0
P10809_1031
57.1
P10809_1050
58.0
P10809_1069
41.9
P10809_1087
53.2
P10809_1110
67.8
T-reg nTPM: 27.8
Samples: 6
Max nTPM: 44.6
Min nTPM: 13.1
P10809_1018
15.8
P10809_1037
27.7
P10809_1056
13.1
P10809_1075
25.8
P10809_1094
44.6
P10809_1106
39.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
222.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 182.2
Samples: 4
Max nTPM: 240.6
Min nTPM: 123.7
RHH5202_R3573
197.9
RHH5230_R3602
240.6
RHH5259_R3631
123.7
RHH5288_R3660
166.4
Effector memory CD8 T-cell nTPM: 222.4
Samples: 4
Max nTPM: 291.1
Min nTPM: 134.1
RHH5203_R3574
291.1
RHH5231_R3603
197.9
RHH5260_R3632
134.1
RHH5289_R3661
266.5
MAIT T-cell nTPM: 168.2
Samples: 4
Max nTPM: 216.5
Min nTPM: 133.6
RHH5233_R3605
216.5
RHH5205_R3576
186.1
RHH5262_R3634
136.5
RHH5297_R3663
133.6
Memory CD4 T-cell TFH nTPM: 154.5
Samples: 4
Max nTPM: 208.7
Min nTPM: 116.8
RHH5300_R3666
145.4
RHH5236_R3608
147.2
RHH5265_R3637
116.8
RHH5208_R3579
208.7
Memory CD4 T-cell Th1 nTPM: 153.1
Samples: 4
Max nTPM: 169.3
Min nTPM: 123.6
RHH5210_R3581
169.3
RHH5302_R3668
168.6
RHH5238_R3610
151.0
RHH5267_R3639
123.6
Memory CD4 T-cell Th1/Th17 nTPM: 130.7
Samples: 4
Max nTPM: 154.7
Min nTPM: 91.9
RHH5303_R3669
154.7
RHH5211_R3582
91.9
RHH5239_R3611
148.2
RHH5268_R3640
128.0
Memory CD4 T-cell Th17 nTPM: 121.0
Samples: 4
Max nTPM: 147.4
Min nTPM: 89.8
RHH5304_R3670
120.9
RHH5212_R3583
89.8
RHH5240_R3612
147.4
RHH5269_R3641
125.8
Memory CD4 T-cell Th2 nTPM: 114.9
Samples: 4
Max nTPM: 138.4
Min nTPM: 98.3
RHH5305_R3671
111.1
RHH5213_R3584
111.9
RHH5241_R3613
138.4
RHH5270_R3642
98.3
Naive CD4 T-cell nTPM: 174.5
Samples: 4
Max nTPM: 206.0
Min nTPM: 136.0
RHH5306_R3672
206.0
RHH5214_R3585
154.6
RHH5242_R3614
201.5
RHH5271_R3643
136.0
Naive CD8 T-cell nTPM: 221.1
Samples: 4
Max nTPM: 280.9
Min nTPM: 172.3
RHH5201_R3572
280.9
RHH5229_R3601
172.3
RHH5258_R3630
182.2
RHH5287_R3659
249.0
Non-Vd2 gdTCR nTPM: 190.8
Samples: 4
Max nTPM: 260.4
Min nTPM: 101.1
RHH5235_R3607
260.4
RHH5264_R3636
101.1
RHH5207_R3578
232.4
RHH5299_R3665
169.2
T-reg nTPM: 104.0
Samples: 4
Max nTPM: 108.8
Min nTPM: 100.7
RHH5301_R3667
100.7
RHH5237_R3609
100.8
RHH5266_R3638
105.8
RHH5209_R3580
108.8
Terminal effector memory CD4 T-cell nTPM: 221.1
Samples: 2
Max nTPM: 245.5
Min nTPM: 196.7
RHH5243_R3615
245.5
RHH5272_R3644
196.7
Terminal effector memory CD8 T-cell nTPM: 222.4
Samples: 4
Max nTPM: 339.2
Min nTPM: 116.4
RHH5232_R3604
339.2
RHH5204_R3575
214.9
RHH5261_R3633
116.4
RHH5296_R3662
218.9
Vd2 gdTCR nTPM: 176.4
Samples: 4
Max nTPM: 290.1
Min nTPM: 118.8
RHH5234_R3606
290.1
RHH5206_R3577
137.3
RHH5263_R3635
118.8
RHH5298_R3664
159.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
