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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
62.3
nTPM
Monaco:
198.6
nTPM
Schmiedel:
116.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
62.3
HPA sample
nTPM
gdT-cell nTPM: 62.3
Samples: 6
Max nTPM: 79.5
Min nTPM: 46.1
P10809_1007
79.5
P10809_1022
61.4
P10809_1041
67.2
P10809_1060
46.1
P10809_1077
52.3
P10809_1098
67.1
MAIT T-cell nTPM: 52.8
Samples: 6
Max nTPM: 75.6
Min nTPM: 44.3
P10809_1006
75.6
P10809_1024
47.1
P10809_1043
44.3
P10809_1062
46.9
P10809_1083
52.6
P10809_1097
50.5
Memory CD4 T-cell nTPM: 45.8
Samples: 6
Max nTPM: 53.3
Min nTPM: 43.1
P10809_1014
53.3
P10809_1026
44.2
P10809_1045
44.1
P10809_1064
43.1
P10809_1086
45.3
P10809_1113
44.9
Memory CD8 T-cell nTPM: 51.8
Samples: 5
Max nTPM: 61.9
Min nTPM: 36.9
P10809_1012
57.4
P10809_1027
36.9
P10809_1046
61.9
P10809_1065
50.9
P10809_1111
51.8
Naive CD4 T-cell nTPM: 34.1
Samples: 6
Max nTPM: 47.1
Min nTPM: 23.1
P10809_1015
47.1
P10809_1030
30.3
P10809_1049
23.1
P10809_1068
38.9
P10809_1085
29.0
P10809_1112
36.2
Naive CD8 T-cell nTPM: 44.0
Samples: 6
Max nTPM: 57.6
Min nTPM: 37.8
P10809_1016
43.0
P10809_1031
37.8
P10809_1050
40.9
P10809_1069
57.6
P10809_1087
45.9
P10809_1110
38.8
T-reg nTPM: 60.3
Samples: 6
Max nTPM: 87.4
Min nTPM: 40.3
P10809_1018
87.4
P10809_1037
54.6
P10809_1056
63.8
P10809_1075
52.0
P10809_1094
63.7
P10809_1106
40.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
198.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 146.6
Samples: 4
Max nTPM: 195.4
Min nTPM: 106.1
RHH5202_R3573
123.6
RHH5230_R3602
106.1
RHH5259_R3631
195.4
RHH5288_R3660
161.4
Effector memory CD8 T-cell nTPM: 179.6
Samples: 4
Max nTPM: 222.4
Min nTPM: 145.0
RHH5203_R3574
160.5
RHH5231_R3603
145.0
RHH5260_R3632
222.4
RHH5289_R3661
190.5
MAIT T-cell nTPM: 178.5
Samples: 4
Max nTPM: 224.3
Min nTPM: 127.5
RHH5233_R3605
127.5
RHH5205_R3576
211.1
RHH5262_R3634
224.3
RHH5297_R3663
151.1
Memory CD4 T-cell TFH nTPM: 150.0
Samples: 4
Max nTPM: 198.3
Min nTPM: 113.8
RHH5300_R3666
146.5
RHH5236_R3608
113.8
RHH5265_R3637
198.3
RHH5208_R3579
141.2
Memory CD4 T-cell Th1 nTPM: 140.0
Samples: 4
Max nTPM: 169.5
Min nTPM: 116.1
RHH5210_R3581
116.1
RHH5302_R3668
130.4
RHH5238_R3610
144.1
RHH5267_R3639
169.5
Memory CD4 T-cell Th1/Th17 nTPM: 154.0
Samples: 4
Max nTPM: 190.5
Min nTPM: 105.6
RHH5303_R3669
105.6
RHH5211_R3582
190.5
RHH5239_R3611
153.6
RHH5268_R3640
166.1
Memory CD4 T-cell Th17 nTPM: 193.5
Samples: 4
Max nTPM: 213.9
Min nTPM: 177.3
RHH5304_R3670
190.0
RHH5212_R3583
177.3
RHH5240_R3612
192.6
RHH5269_R3641
213.9
Memory CD4 T-cell Th2 nTPM: 150.9
Samples: 4
Max nTPM: 187.4
Min nTPM: 111.5
RHH5305_R3671
146.5
RHH5213_R3584
158.0
RHH5241_R3613
111.5
RHH5270_R3642
187.4
Naive CD4 T-cell nTPM: 126.8
Samples: 4
Max nTPM: 148.6
Min nTPM: 107.9
RHH5306_R3672
107.9
RHH5214_R3585
121.4
RHH5242_R3614
129.4
RHH5271_R3643
148.6
Naive CD8 T-cell nTPM: 119.2
Samples: 4
Max nTPM: 138.4
Min nTPM: 96.0
RHH5201_R3572
96.0
RHH5229_R3601
121.7
RHH5258_R3630
138.4
RHH5287_R3659
120.8
Non-Vd2 gdTCR nTPM: 198.7
Samples: 4
Max nTPM: 222.2
Min nTPM: 174.0
RHH5235_R3607
184.2
RHH5264_R3636
222.2
RHH5207_R3578
214.2
RHH5299_R3665
174.0
T-reg nTPM: 142.0
Samples: 4
Max nTPM: 159.7
Min nTPM: 124.6
RHH5301_R3667
144.7
RHH5237_R3609
124.6
RHH5266_R3638
159.7
RHH5209_R3580
139.0
Terminal effector memory CD4 T-cell nTPM: 193.6
Samples: 2
Max nTPM: 206.8
Min nTPM: 180.3
RHH5243_R3615
180.3
RHH5272_R3644
206.8
Terminal effector memory CD8 T-cell nTPM: 184.2
Samples: 4
Max nTPM: 223.5
Min nTPM: 138.0
RHH5232_R3604
179.6
RHH5204_R3575
138.0
RHH5261_R3633
223.5
RHH5296_R3662
195.8
Vd2 gdTCR nTPM: 165.5
Samples: 4
Max nTPM: 219.1
Min nTPM: 139.9
RHH5234_R3606
139.9
RHH5206_R3577
157.6
RHH5263_R3635
219.1
RHH5298_R3664
145.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
